Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32471 | 97636;97637;97638 | chr2:178542345;178542344;178542343 | chr2:179407072;179407071;179407070 |
N2AB | 30830 | 92713;92714;92715 | chr2:178542345;178542344;178542343 | chr2:179407072;179407071;179407070 |
N2A | 29903 | 89932;89933;89934 | chr2:178542345;178542344;178542343 | chr2:179407072;179407071;179407070 |
N2B | 23406 | 70441;70442;70443 | chr2:178542345;178542344;178542343 | chr2:179407072;179407071;179407070 |
Novex-1 | 23531 | 70816;70817;70818 | chr2:178542345;178542344;178542343 | chr2:179407072;179407071;179407070 |
Novex-2 | 23598 | 71017;71018;71019 | chr2:178542345;178542344;178542343 | chr2:179407072;179407071;179407070 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1412547429 | None | 0.999 | N | 0.611 | 0.34 | 0.658862992856 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/A | rs1412547429 | None | 0.999 | N | 0.611 | 0.34 | 0.658862992856 | gnomAD-4.0.0 | 6.57203E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47024E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5859 | likely_pathogenic | 0.4685 | ambiguous | -1.838 | Destabilizing | 0.999 | D | 0.611 | neutral | N | 0.499029036 | None | None | N |
V/C | 0.8598 | likely_pathogenic | 0.8135 | pathogenic | -0.969 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
V/D | 0.9555 | likely_pathogenic | 0.9243 | pathogenic | -2.56 | Highly Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
V/E | 0.8301 | likely_pathogenic | 0.7724 | pathogenic | -2.29 | Highly Destabilizing | 1.0 | D | 0.774 | deleterious | N | 0.441383455 | None | None | N |
V/F | 0.6272 | likely_pathogenic | 0.4854 | ambiguous | -0.984 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
V/G | 0.7524 | likely_pathogenic | 0.6479 | pathogenic | -2.377 | Highly Destabilizing | 1.0 | D | 0.817 | deleterious | N | 0.472711911 | None | None | N |
V/H | 0.9523 | likely_pathogenic | 0.9144 | pathogenic | -2.329 | Highly Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
V/I | 0.1037 | likely_benign | 0.0933 | benign | -0.295 | Destabilizing | 0.998 | D | 0.59 | neutral | None | None | None | None | N |
V/K | 0.9102 | likely_pathogenic | 0.8609 | pathogenic | -1.216 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
V/L | 0.5258 | ambiguous | 0.4001 | ambiguous | -0.295 | Destabilizing | 0.997 | D | 0.621 | neutral | N | 0.462204231 | None | None | N |
V/M | 0.4166 | ambiguous | 0.3048 | benign | -0.422 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | N | 0.48535045 | None | None | N |
V/N | 0.8594 | likely_pathogenic | 0.7879 | pathogenic | -1.705 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
V/P | 0.9928 | likely_pathogenic | 0.9883 | pathogenic | -0.788 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
V/Q | 0.7724 | likely_pathogenic | 0.7 | pathogenic | -1.423 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
V/R | 0.8608 | likely_pathogenic | 0.7862 | pathogenic | -1.327 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
V/S | 0.6753 | likely_pathogenic | 0.5722 | pathogenic | -2.196 | Highly Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
V/T | 0.5003 | ambiguous | 0.4304 | ambiguous | -1.791 | Destabilizing | 0.999 | D | 0.622 | neutral | None | None | None | None | N |
V/W | 0.9857 | likely_pathogenic | 0.97 | pathogenic | -1.582 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
V/Y | 0.9172 | likely_pathogenic | 0.8593 | pathogenic | -1.174 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.