Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32488 | 97687;97688;97689 | chr2:178542294;178542293;178542292 | chr2:179407021;179407020;179407019 |
N2AB | 30847 | 92764;92765;92766 | chr2:178542294;178542293;178542292 | chr2:179407021;179407020;179407019 |
N2A | 29920 | 89983;89984;89985 | chr2:178542294;178542293;178542292 | chr2:179407021;179407020;179407019 |
N2B | 23423 | 70492;70493;70494 | chr2:178542294;178542293;178542292 | chr2:179407021;179407020;179407019 |
Novex-1 | 23548 | 70867;70868;70869 | chr2:178542294;178542293;178542292 | chr2:179407021;179407020;179407019 |
Novex-2 | 23615 | 71068;71069;71070 | chr2:178542294;178542293;178542292 | chr2:179407021;179407020;179407019 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.999 | N | 0.839 | 0.447 | 0.743508982932 | gnomAD-4.0.0 | 1.23355E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.62055E-05 | 0 | 0 |
S/P | None | None | 0.999 | N | 0.789 | 0.483 | 0.360565625551 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.4984 | ambiguous | 0.4586 | ambiguous | -0.343 | Destabilizing | 0.994 | D | 0.659 | prob.neutral | N | 0.491536955 | None | None | N |
S/C | 0.5926 | likely_pathogenic | 0.5358 | ambiguous | -0.182 | Destabilizing | 1.0 | D | 0.75 | deleterious | N | 0.518163586 | None | None | N |
S/D | 0.9596 | likely_pathogenic | 0.9531 | pathogenic | -0.291 | Destabilizing | 0.998 | D | 0.599 | neutral | None | None | None | None | N |
S/E | 0.987 | likely_pathogenic | 0.9862 | pathogenic | -0.151 | Destabilizing | 0.998 | D | 0.591 | neutral | None | None | None | None | N |
S/F | 0.9875 | likely_pathogenic | 0.9825 | pathogenic | -0.294 | Destabilizing | 0.999 | D | 0.839 | deleterious | N | 0.517656607 | None | None | N |
S/G | 0.3931 | ambiguous | 0.3322 | benign | -0.707 | Destabilizing | 0.998 | D | 0.636 | neutral | None | None | None | None | N |
S/H | 0.9789 | likely_pathogenic | 0.9741 | pathogenic | -1.05 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
S/I | 0.971 | likely_pathogenic | 0.9671 | pathogenic | 0.55 | Stabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
S/K | 0.9977 | likely_pathogenic | 0.9973 | pathogenic | 0.007 | Stabilizing | 0.998 | D | 0.594 | neutral | None | None | None | None | N |
S/L | 0.8349 | likely_pathogenic | 0.8064 | pathogenic | 0.55 | Stabilizing | 0.999 | D | 0.696 | prob.delet. | None | None | None | None | N |
S/M | 0.839 | likely_pathogenic | 0.8272 | pathogenic | 0.327 | Stabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
S/N | 0.8876 | likely_pathogenic | 0.8606 | pathogenic | -0.457 | Destabilizing | 0.998 | D | 0.623 | neutral | None | None | None | None | N |
S/P | 0.9909 | likely_pathogenic | 0.9894 | pathogenic | 0.289 | Stabilizing | 0.999 | D | 0.789 | deleterious | N | 0.499552352 | None | None | N |
S/Q | 0.9862 | likely_pathogenic | 0.9844 | pathogenic | -0.274 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
S/R | 0.9976 | likely_pathogenic | 0.9968 | pathogenic | -0.291 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
S/T | 0.2157 | likely_benign | 0.1845 | benign | -0.253 | Destabilizing | 0.997 | D | 0.613 | neutral | D | 0.522559257 | None | None | N |
S/V | 0.9331 | likely_pathogenic | 0.9215 | pathogenic | 0.289 | Stabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
S/W | 0.9827 | likely_pathogenic | 0.978 | pathogenic | -0.505 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
S/Y | 0.9742 | likely_pathogenic | 0.966 | pathogenic | -0.037 | Destabilizing | 0.999 | D | 0.854 | deleterious | D | 0.529012912 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.