Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3249 | 9970;9971;9972 | chr2:178764770;178764769;178764768 | chr2:179629497;179629496;179629495 |
N2AB | 3249 | 9970;9971;9972 | chr2:178764770;178764769;178764768 | chr2:179629497;179629496;179629495 |
N2A | 3249 | 9970;9971;9972 | chr2:178764770;178764769;178764768 | chr2:179629497;179629496;179629495 |
N2B | 3203 | 9832;9833;9834 | chr2:178764770;178764769;178764768 | chr2:179629497;179629496;179629495 |
Novex-1 | 3203 | 9832;9833;9834 | chr2:178764770;178764769;178764768 | chr2:179629497;179629496;179629495 |
Novex-2 | 3203 | 9832;9833;9834 | chr2:178764770;178764769;178764768 | chr2:179629497;179629496;179629495 |
Novex-3 | 3249 | 9970;9971;9972 | chr2:178764770;178764769;178764768 | chr2:179629497;179629496;179629495 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs2090055572 | None | 0.122 | N | 0.119 | 0.18 | 0.223146558224 | gnomAD-4.0.0 | 2.73689E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59744E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0889 | likely_benign | 0.1256 | benign | -0.408 | Destabilizing | 0.122 | N | 0.119 | neutral | N | 0.51014397 | None | None | N |
T/C | 0.5247 | ambiguous | 0.682 | pathogenic | -0.427 | Destabilizing | 1.0 | D | 0.472 | neutral | None | None | None | None | N |
T/D | 0.441 | ambiguous | 0.6435 | pathogenic | 0.244 | Stabilizing | 0.97 | D | 0.43 | neutral | None | None | None | None | N |
T/E | 0.3002 | likely_benign | 0.4456 | ambiguous | 0.192 | Stabilizing | 0.97 | D | 0.415 | neutral | None | None | None | None | N |
T/F | 0.2623 | likely_benign | 0.4304 | ambiguous | -0.792 | Destabilizing | 0.999 | D | 0.516 | neutral | None | None | None | None | N |
T/G | 0.3684 | ambiguous | 0.551 | ambiguous | -0.571 | Destabilizing | 0.931 | D | 0.44 | neutral | None | None | None | None | N |
T/H | 0.2542 | likely_benign | 0.3733 | ambiguous | -0.816 | Destabilizing | 1.0 | D | 0.515 | neutral | None | None | None | None | N |
T/I | 0.1568 | likely_benign | 0.2448 | benign | -0.093 | Destabilizing | 0.994 | D | 0.418 | neutral | N | 0.512655345 | None | None | N |
T/K | 0.2039 | likely_benign | 0.2995 | benign | -0.42 | Destabilizing | 0.97 | D | 0.428 | neutral | None | None | None | None | N |
T/L | 0.1157 | likely_benign | 0.1768 | benign | -0.093 | Destabilizing | 0.97 | D | 0.418 | neutral | None | None | None | None | N |
T/M | 0.0859 | likely_benign | 0.1065 | benign | -0.066 | Destabilizing | 1.0 | D | 0.467 | neutral | None | None | None | None | N |
T/N | 0.1525 | likely_benign | 0.2261 | benign | -0.316 | Destabilizing | 0.961 | D | 0.413 | neutral | D | 0.559350148 | None | None | N |
T/P | 0.2167 | likely_benign | 0.4262 | ambiguous | -0.168 | Destabilizing | 0.994 | D | 0.422 | neutral | D | 0.618652304 | None | None | N |
T/Q | 0.2309 | likely_benign | 0.3173 | benign | -0.485 | Destabilizing | 0.996 | D | 0.453 | neutral | None | None | None | None | N |
T/R | 0.1596 | likely_benign | 0.2472 | benign | -0.171 | Destabilizing | 0.996 | D | 0.428 | neutral | None | None | None | None | N |
T/S | 0.1223 | likely_benign | 0.1662 | benign | -0.544 | Destabilizing | 0.287 | N | 0.107 | neutral | N | 0.493178448 | None | None | N |
T/V | 0.1341 | likely_benign | 0.1854 | benign | -0.168 | Destabilizing | 0.97 | D | 0.405 | neutral | None | None | None | None | N |
T/W | 0.6369 | likely_pathogenic | 0.7865 | pathogenic | -0.792 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
T/Y | 0.3602 | ambiguous | 0.514 | ambiguous | -0.509 | Destabilizing | 0.999 | D | 0.525 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.