Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32509 | 97750;97751;97752 | chr2:178541552;178541551;178541550 | chr2:179406279;179406278;179406277 |
N2AB | 30868 | 92827;92828;92829 | chr2:178541552;178541551;178541550 | chr2:179406279;179406278;179406277 |
N2A | 29941 | 90046;90047;90048 | chr2:178541552;178541551;178541550 | chr2:179406279;179406278;179406277 |
N2B | 23444 | 70555;70556;70557 | chr2:178541552;178541551;178541550 | chr2:179406279;179406278;179406277 |
Novex-1 | 23569 | 70930;70931;70932 | chr2:178541552;178541551;178541550 | chr2:179406279;179406278;179406277 |
Novex-2 | 23636 | 71131;71132;71133 | chr2:178541552;178541551;178541550 | chr2:179406279;179406278;179406277 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | None | N | 0.129 | 0.244 | 0.225902525712 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
F/V | rs1233350994 | -0.632 | 0.09 | N | 0.415 | 0.251 | 0.464183351471 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.65E-05 | None | 0 | None | 0 | 0 | 0 |
F/V | rs1233350994 | -0.632 | 0.09 | N | 0.415 | 0.251 | 0.464183351471 | gnomAD-4.0.0 | 9.60257E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.05E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.28 | likely_benign | 0.2324 | benign | -1.465 | Destabilizing | 0.388 | N | 0.461 | neutral | None | None | None | None | I |
F/C | 0.2467 | likely_benign | 0.2032 | benign | -0.392 | Destabilizing | 0.975 | D | 0.457 | neutral | N | 0.429649096 | None | None | I |
F/D | 0.5918 | likely_pathogenic | 0.5737 | pathogenic | 0.147 | Stabilizing | 0.932 | D | 0.473 | neutral | None | None | None | None | I |
F/E | 0.6115 | likely_pathogenic | 0.5974 | pathogenic | 0.14 | Stabilizing | 0.818 | D | 0.473 | neutral | None | None | None | None | I |
F/G | 0.5495 | ambiguous | 0.4868 | ambiguous | -1.708 | Destabilizing | 0.818 | D | 0.433 | neutral | None | None | None | None | I |
F/H | 0.3717 | ambiguous | 0.3508 | ambiguous | -0.146 | Destabilizing | 0.981 | D | 0.42 | neutral | None | None | None | None | I |
F/I | 0.1646 | likely_benign | 0.1463 | benign | -0.804 | Destabilizing | 0.09 | N | 0.422 | neutral | N | 0.417487875 | None | None | I |
F/K | 0.6849 | likely_pathogenic | 0.6708 | pathogenic | -0.423 | Destabilizing | 0.818 | D | 0.443 | neutral | None | None | None | None | I |
F/L | 0.6718 | likely_pathogenic | 0.5739 | pathogenic | -0.804 | Destabilizing | None | N | 0.129 | neutral | N | 0.373043665 | None | None | I |
F/M | 0.3549 | ambiguous | 0.3026 | benign | -0.5 | Destabilizing | 0.69 | D | 0.446 | neutral | None | None | None | None | I |
F/N | 0.4473 | ambiguous | 0.4076 | ambiguous | -0.305 | Destabilizing | 0.932 | D | 0.465 | neutral | None | None | None | None | I |
F/P | 0.9601 | likely_pathogenic | 0.9432 | pathogenic | -1.008 | Destabilizing | 0.932 | D | 0.459 | neutral | None | None | None | None | I |
F/Q | 0.5483 | ambiguous | 0.5081 | ambiguous | -0.443 | Destabilizing | 0.932 | D | 0.46 | neutral | None | None | None | None | I |
F/R | 0.533 | ambiguous | 0.5125 | ambiguous | 0.213 | Stabilizing | 0.818 | D | 0.469 | neutral | None | None | None | None | I |
F/S | 0.1735 | likely_benign | 0.1533 | benign | -1.021 | Destabilizing | 0.492 | N | 0.447 | neutral | N | 0.323497492 | None | None | I |
F/T | 0.183 | likely_benign | 0.1615 | benign | -0.939 | Destabilizing | 0.388 | N | 0.451 | neutral | None | None | None | None | I |
F/V | 0.1574 | likely_benign | 0.138 | benign | -1.008 | Destabilizing | 0.09 | N | 0.415 | neutral | N | 0.379238918 | None | None | I |
F/W | 0.3725 | ambiguous | 0.3501 | ambiguous | -0.448 | Destabilizing | 0.981 | D | 0.432 | neutral | None | None | None | None | I |
F/Y | 0.1494 | likely_benign | 0.1444 | benign | -0.485 | Destabilizing | 0.492 | N | 0.436 | neutral | N | 0.44051945 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.