Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3251 | 9976;9977;9978 | chr2:178764764;178764763;178764762 | chr2:179629491;179629490;179629489 |
N2AB | 3251 | 9976;9977;9978 | chr2:178764764;178764763;178764762 | chr2:179629491;179629490;179629489 |
N2A | 3251 | 9976;9977;9978 | chr2:178764764;178764763;178764762 | chr2:179629491;179629490;179629489 |
N2B | 3205 | 9838;9839;9840 | chr2:178764764;178764763;178764762 | chr2:179629491;179629490;179629489 |
Novex-1 | 3205 | 9838;9839;9840 | chr2:178764764;178764763;178764762 | chr2:179629491;179629490;179629489 |
Novex-2 | 3205 | 9838;9839;9840 | chr2:178764764;178764763;178764762 | chr2:179629491;179629490;179629489 |
Novex-3 | 3251 | 9976;9977;9978 | chr2:178764764;178764763;178764762 | chr2:179629491;179629490;179629489 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/L | None | None | 0.351 | N | 0.446 | 0.288 | 0.488897681448 | gnomAD-4.0.0 | 1.36833E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.03956E-05 | None | 0 | 0 | 0 | 0 | 0 |
Q/R | None | None | 0.183 | N | 0.339 | 0.244 | 0.163833314356 | gnomAD-4.0.0 | 6.84167E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99331E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1804 | likely_benign | 0.2319 | benign | -0.204 | Destabilizing | 0.129 | N | 0.395 | neutral | None | None | None | None | N |
Q/C | 0.6942 | likely_pathogenic | 0.8664 | pathogenic | 0.108 | Stabilizing | 0.983 | D | 0.446 | neutral | None | None | None | None | N |
Q/D | 0.3968 | ambiguous | 0.6141 | pathogenic | 0.042 | Stabilizing | 0.061 | N | 0.277 | neutral | None | None | None | None | N |
Q/E | 0.0685 | likely_benign | 0.0773 | benign | 0.014 | Stabilizing | None | N | 0.19 | neutral | N | 0.383616437 | None | None | N |
Q/F | 0.678 | likely_pathogenic | 0.8231 | pathogenic | -0.395 | Destabilizing | 0.94 | D | 0.451 | neutral | None | None | None | None | N |
Q/G | 0.3348 | likely_benign | 0.4874 | ambiguous | -0.389 | Destabilizing | 0.228 | N | 0.457 | neutral | None | None | None | None | N |
Q/H | 0.2632 | likely_benign | 0.4237 | ambiguous | -0.253 | Destabilizing | 0.794 | D | 0.343 | neutral | N | 0.479920261 | None | None | N |
Q/I | 0.3478 | ambiguous | 0.4527 | ambiguous | 0.193 | Stabilizing | 0.836 | D | 0.457 | neutral | None | None | None | None | N |
Q/K | 0.1128 | likely_benign | 0.1559 | benign | 0.055 | Stabilizing | 0.047 | N | 0.285 | neutral | N | 0.444503174 | None | None | N |
Q/L | 0.1255 | likely_benign | 0.1701 | benign | 0.193 | Stabilizing | 0.351 | N | 0.446 | neutral | N | 0.414070036 | None | None | N |
Q/M | 0.3448 | ambiguous | 0.4353 | ambiguous | 0.381 | Stabilizing | 0.94 | D | 0.366 | neutral | None | None | None | None | N |
Q/N | 0.3416 | ambiguous | 0.4998 | ambiguous | -0.297 | Destabilizing | 0.418 | N | 0.307 | neutral | None | None | None | None | N |
Q/P | 0.1156 | likely_benign | 0.1588 | benign | 0.089 | Stabilizing | 0.523 | D | 0.406 | neutral | N | 0.437925905 | None | None | N |
Q/R | 0.1233 | likely_benign | 0.1856 | benign | 0.212 | Stabilizing | 0.183 | N | 0.339 | neutral | N | 0.455769223 | None | None | N |
Q/S | 0.2428 | likely_benign | 0.3577 | ambiguous | -0.289 | Destabilizing | 0.129 | N | 0.341 | neutral | None | None | None | None | N |
Q/T | 0.1878 | likely_benign | 0.2668 | benign | -0.162 | Destabilizing | 0.418 | N | 0.404 | neutral | None | None | None | None | N |
Q/V | 0.2298 | likely_benign | 0.288 | benign | 0.089 | Stabilizing | 0.418 | N | 0.474 | neutral | None | None | None | None | N |
Q/W | 0.6299 | likely_pathogenic | 0.824 | pathogenic | -0.372 | Destabilizing | 0.983 | D | 0.46 | neutral | None | None | None | None | N |
Q/Y | 0.5159 | ambiguous | 0.7028 | pathogenic | -0.117 | Destabilizing | 0.94 | D | 0.418 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.