Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32524 | 97795;97796;97797 | chr2:178541507;178541506;178541505 | chr2:179406234;179406233;179406232 |
N2AB | 30883 | 92872;92873;92874 | chr2:178541507;178541506;178541505 | chr2:179406234;179406233;179406232 |
N2A | 29956 | 90091;90092;90093 | chr2:178541507;178541506;178541505 | chr2:179406234;179406233;179406232 |
N2B | 23459 | 70600;70601;70602 | chr2:178541507;178541506;178541505 | chr2:179406234;179406233;179406232 |
Novex-1 | 23584 | 70975;70976;70977 | chr2:178541507;178541506;178541505 | chr2:179406234;179406233;179406232 |
Novex-2 | 23651 | 71176;71177;71178 | chr2:178541507;178541506;178541505 | chr2:179406234;179406233;179406232 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.939 | N | 0.547 | 0.299 | 0.392395365052 | gnomAD-4.0.0 | 1.59264E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86041E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1 | likely_benign | 0.1098 | benign | 0.004 | Stabilizing | 0.939 | D | 0.532 | neutral | N | 0.436903142 | None | None | N |
E/C | 0.6038 | likely_pathogenic | 0.6747 | pathogenic | -0.163 | Destabilizing | 0.999 | D | 0.704 | prob.neutral | None | None | None | None | N |
E/D | 0.1228 | likely_benign | 0.117 | benign | -0.207 | Destabilizing | 0.046 | N | 0.26 | neutral | N | 0.423859274 | None | None | N |
E/F | 0.5576 | ambiguous | 0.6114 | pathogenic | -0.086 | Destabilizing | 0.998 | D | 0.637 | neutral | None | None | None | None | N |
E/G | 0.1029 | likely_benign | 0.1406 | benign | -0.107 | Destabilizing | 0.046 | N | 0.346 | neutral | N | 0.510824898 | None | None | N |
E/H | 0.3045 | likely_benign | 0.336 | benign | 0.502 | Stabilizing | 0.999 | D | 0.518 | neutral | None | None | None | None | N |
E/I | 0.2149 | likely_benign | 0.2267 | benign | 0.238 | Stabilizing | 0.993 | D | 0.645 | neutral | None | None | None | None | N |
E/K | 0.0801 | likely_benign | 0.0955 | benign | 0.379 | Stabilizing | 0.939 | D | 0.547 | neutral | N | 0.441866245 | None | None | N |
E/L | 0.2301 | likely_benign | 0.2568 | benign | 0.238 | Stabilizing | 0.993 | D | 0.645 | neutral | None | None | None | None | N |
E/M | 0.295 | likely_benign | 0.3259 | benign | -0.003 | Destabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | N |
E/N | 0.1979 | likely_benign | 0.208 | benign | 0.269 | Stabilizing | 0.973 | D | 0.507 | neutral | None | None | None | None | N |
E/P | 0.3593 | ambiguous | 0.41 | ambiguous | 0.178 | Stabilizing | 0.993 | D | 0.523 | neutral | None | None | None | None | N |
E/Q | 0.1021 | likely_benign | 0.1155 | benign | 0.261 | Stabilizing | 0.991 | D | 0.5 | neutral | N | 0.489294832 | None | None | N |
E/R | 0.1231 | likely_benign | 0.1564 | benign | 0.611 | Stabilizing | 0.993 | D | 0.533 | neutral | None | None | None | None | N |
E/S | 0.1369 | likely_benign | 0.1549 | benign | 0.083 | Stabilizing | 0.953 | D | 0.53 | neutral | None | None | None | None | N |
E/T | 0.1468 | likely_benign | 0.1577 | benign | 0.175 | Stabilizing | 0.993 | D | 0.455 | neutral | None | None | None | None | N |
E/V | 0.1351 | likely_benign | 0.1409 | benign | 0.178 | Stabilizing | 0.991 | D | 0.589 | neutral | N | 0.472671941 | None | None | N |
E/W | 0.6815 | likely_pathogenic | 0.761 | pathogenic | -0.057 | Destabilizing | 0.999 | D | 0.712 | prob.delet. | None | None | None | None | N |
E/Y | 0.4436 | ambiguous | 0.4917 | ambiguous | 0.136 | Stabilizing | 0.998 | D | 0.593 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.