Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32569 | 97930;97931;97932 | chr2:178541372;178541371;178541370 | chr2:179406099;179406098;179406097 |
N2AB | 30928 | 93007;93008;93009 | chr2:178541372;178541371;178541370 | chr2:179406099;179406098;179406097 |
N2A | 30001 | 90226;90227;90228 | chr2:178541372;178541371;178541370 | chr2:179406099;179406098;179406097 |
N2B | 23504 | 70735;70736;70737 | chr2:178541372;178541371;178541370 | chr2:179406099;179406098;179406097 |
Novex-1 | 23629 | 71110;71111;71112 | chr2:178541372;178541371;178541370 | chr2:179406099;179406098;179406097 |
Novex-2 | 23696 | 71311;71312;71313 | chr2:178541372;178541371;178541370 | chr2:179406099;179406098;179406097 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs760105762 | -0.373 | 1.0 | N | 0.637 | 0.314 | 0.398283496042 | gnomAD-2.1.1 | 4.2E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.31E-06 | 0 |
E/Q | rs760105762 | -0.373 | 1.0 | N | 0.637 | 0.314 | 0.398283496042 | gnomAD-4.0.0 | 1.37505E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80484E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2053 | likely_benign | 0.2155 | benign | -0.882 | Destabilizing | 0.999 | D | 0.706 | prob.neutral | N | 0.511459616 | None | None | N |
E/C | 0.849 | likely_pathogenic | 0.8516 | pathogenic | -0.581 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
E/D | 0.4603 | ambiguous | 0.4499 | ambiguous | -1.464 | Destabilizing | 0.999 | D | 0.492 | neutral | N | 0.50384021 | None | None | N |
E/F | 0.8541 | likely_pathogenic | 0.8597 | pathogenic | -0.322 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
E/G | 0.4113 | ambiguous | 0.43 | ambiguous | -1.315 | Destabilizing | 1.0 | D | 0.764 | deleterious | N | 0.483538465 | None | None | N |
E/H | 0.7176 | likely_pathogenic | 0.7451 | pathogenic | -0.642 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
E/I | 0.4298 | ambiguous | 0.4703 | ambiguous | 0.334 | Stabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
E/K | 0.3876 | ambiguous | 0.4541 | ambiguous | -1.303 | Destabilizing | 0.999 | D | 0.624 | neutral | N | 0.44650406 | None | None | N |
E/L | 0.4692 | ambiguous | 0.496 | ambiguous | 0.334 | Stabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
E/M | 0.5009 | ambiguous | 0.533 | ambiguous | 0.927 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
E/N | 0.6104 | likely_pathogenic | 0.6253 | pathogenic | -1.653 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
E/P | 0.6938 | likely_pathogenic | 0.6673 | pathogenic | -0.052 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
E/Q | 0.178 | likely_benign | 0.2016 | benign | -1.371 | Destabilizing | 1.0 | D | 0.637 | neutral | N | 0.472786585 | None | None | N |
E/R | 0.4828 | ambiguous | 0.5435 | ambiguous | -1.114 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
E/S | 0.3651 | ambiguous | 0.386 | ambiguous | -2.165 | Highly Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | N |
E/T | 0.3088 | likely_benign | 0.3421 | ambiguous | -1.789 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
E/V | 0.255 | likely_benign | 0.2881 | benign | -0.052 | Destabilizing | 1.0 | D | 0.795 | deleterious | N | 0.513230485 | None | None | N |
E/W | 0.9432 | likely_pathogenic | 0.9506 | pathogenic | -0.325 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
E/Y | 0.789 | likely_pathogenic | 0.8021 | pathogenic | -0.139 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.