Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32592 | 97999;98000;98001 | chr2:178541303;178541302;178541301 | chr2:179406030;179406029;179406028 |
N2AB | 30951 | 93076;93077;93078 | chr2:178541303;178541302;178541301 | chr2:179406030;179406029;179406028 |
N2A | 30024 | 90295;90296;90297 | chr2:178541303;178541302;178541301 | chr2:179406030;179406029;179406028 |
N2B | 23527 | 70804;70805;70806 | chr2:178541303;178541302;178541301 | chr2:179406030;179406029;179406028 |
Novex-1 | 23652 | 71179;71180;71181 | chr2:178541303;178541302;178541301 | chr2:179406030;179406029;179406028 |
Novex-2 | 23719 | 71380;71381;71382 | chr2:178541303;178541302;178541301 | chr2:179406030;179406029;179406028 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | None | N | 0.161 | 0.092 | 0.268211541103 | gnomAD-4.0.0 | 1.46314E-06 | None | None | None | None | N | None | 3.17319E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.35146E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.0627 | likely_benign | 0.0877 | benign | -1.931 | Destabilizing | None | N | 0.401 | neutral | None | None | None | None | N |
I/C | 0.2797 | likely_benign | 0.3397 | benign | -1.087 | Destabilizing | 0.204 | N | 0.581 | neutral | None | None | None | None | N |
I/D | 0.3822 | ambiguous | 0.4954 | ambiguous | -1.929 | Destabilizing | 0.035 | N | 0.68 | prob.neutral | None | None | None | None | N |
I/E | 0.2515 | likely_benign | 0.3571 | ambiguous | -1.858 | Destabilizing | 0.035 | N | 0.619 | neutral | None | None | None | None | N |
I/F | 0.1096 | likely_benign | 0.1335 | benign | -1.236 | Destabilizing | 0.026 | N | 0.547 | neutral | N | 0.515449644 | None | None | N |
I/G | 0.267 | likely_benign | 0.3355 | benign | -2.309 | Highly Destabilizing | 0.007 | N | 0.586 | neutral | None | None | None | None | N |
I/H | 0.2386 | likely_benign | 0.3223 | benign | -1.514 | Destabilizing | 0.439 | N | 0.687 | prob.delet. | None | None | None | None | N |
I/K | 0.1717 | likely_benign | 0.2454 | benign | -1.582 | Destabilizing | 0.035 | N | 0.613 | neutral | None | None | None | None | N |
I/L | 0.0844 | likely_benign | 0.1007 | benign | -0.921 | Destabilizing | 0.001 | N | 0.325 | neutral | N | 0.487684253 | None | None | N |
I/M | 0.0613 | likely_benign | 0.071 | benign | -0.678 | Destabilizing | 0.195 | N | 0.493 | neutral | N | 0.521722256 | None | None | N |
I/N | 0.1261 | likely_benign | 0.1911 | benign | -1.533 | Destabilizing | 0.026 | N | 0.71 | prob.delet. | N | 0.49517253 | None | None | N |
I/P | 0.8063 | likely_pathogenic | 0.8732 | pathogenic | -1.231 | Destabilizing | 0.068 | N | 0.699 | prob.delet. | None | None | None | None | N |
I/Q | 0.178 | likely_benign | 0.2359 | benign | -1.645 | Destabilizing | 0.204 | N | 0.765 | deleterious | None | None | None | None | N |
I/R | 0.124 | likely_benign | 0.1836 | benign | -0.964 | Destabilizing | 0.035 | N | 0.739 | deleterious | None | None | None | None | N |
I/S | 0.0865 | likely_benign | 0.126 | benign | -2.078 | Highly Destabilizing | 0.006 | N | 0.635 | neutral | N | 0.493905082 | None | None | N |
I/T | 0.052 | likely_benign | 0.0723 | benign | -1.893 | Destabilizing | None | N | 0.374 | neutral | N | 0.481788308 | None | None | N |
I/V | 0.0554 | likely_benign | 0.0551 | benign | -1.231 | Destabilizing | None | N | 0.161 | neutral | N | 0.414301215 | None | None | N |
I/W | 0.5909 | likely_pathogenic | 0.6706 | pathogenic | -1.432 | Destabilizing | 0.747 | D | 0.715 | prob.delet. | None | None | None | None | N |
I/Y | 0.2784 | likely_benign | 0.3736 | ambiguous | -1.196 | Destabilizing | 0.204 | N | 0.685 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.