Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3260 | 10003;10004;10005 | chr2:178764737;178764736;178764735 | chr2:179629464;179629463;179629462 |
N2AB | 3260 | 10003;10004;10005 | chr2:178764737;178764736;178764735 | chr2:179629464;179629463;179629462 |
N2A | 3260 | 10003;10004;10005 | chr2:178764737;178764736;178764735 | chr2:179629464;179629463;179629462 |
N2B | 3214 | 9865;9866;9867 | chr2:178764737;178764736;178764735 | chr2:179629464;179629463;179629462 |
Novex-1 | 3214 | 9865;9866;9867 | chr2:178764737;178764736;178764735 | chr2:179629464;179629463;179629462 |
Novex-2 | 3214 | 9865;9866;9867 | chr2:178764737;178764736;178764735 | chr2:179629464;179629463;179629462 |
Novex-3 | 3260 | 10003;10004;10005 | chr2:178764737;178764736;178764735 | chr2:179629464;179629463;179629462 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 0.949 | D | 0.812 | 0.573 | 0.519728874731 | gnomAD-4.0.0 | 1.5907E-06 | None | None | None | None | N | None | 0 | 2.28686E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4903 | ambiguous | 0.5961 | pathogenic | -1.298 | Destabilizing | 0.996 | D | 0.704 | prob.neutral | None | None | None | None | N |
A/D | 0.9696 | likely_pathogenic | 0.9944 | pathogenic | -2.701 | Highly Destabilizing | 0.901 | D | 0.845 | deleterious | D | 0.602232862 | None | None | N |
A/E | 0.9491 | likely_pathogenic | 0.9886 | pathogenic | -2.555 | Highly Destabilizing | 0.923 | D | 0.823 | deleterious | None | None | None | None | N |
A/F | 0.8211 | likely_pathogenic | 0.933 | pathogenic | -0.891 | Destabilizing | 0.961 | D | 0.861 | deleterious | None | None | None | None | N |
A/G | 0.2971 | likely_benign | 0.479 | ambiguous | -1.752 | Destabilizing | 0.722 | D | 0.698 | prob.neutral | D | 0.522336766 | None | None | N |
A/H | 0.9623 | likely_pathogenic | 0.9893 | pathogenic | -2.122 | Highly Destabilizing | 0.996 | D | 0.871 | deleterious | None | None | None | None | N |
A/I | 0.4405 | ambiguous | 0.6469 | pathogenic | -0.222 | Destabilizing | 0.633 | D | 0.777 | deleterious | None | None | None | None | N |
A/K | 0.9799 | likely_pathogenic | 0.9959 | pathogenic | -1.592 | Destabilizing | 0.923 | D | 0.83 | deleterious | None | None | None | None | N |
A/L | 0.4009 | ambiguous | 0.6036 | pathogenic | -0.222 | Destabilizing | 0.415 | N | 0.764 | deleterious | None | None | None | None | N |
A/M | 0.3804 | ambiguous | 0.6399 | pathogenic | -0.328 | Destabilizing | 0.961 | D | 0.817 | deleterious | None | None | None | None | N |
A/N | 0.8693 | likely_pathogenic | 0.9695 | pathogenic | -1.744 | Destabilizing | 0.923 | D | 0.859 | deleterious | None | None | None | None | N |
A/P | 0.944 | likely_pathogenic | 0.9882 | pathogenic | -0.552 | Destabilizing | 0.949 | D | 0.812 | deleterious | D | 0.602232862 | None | None | N |
A/Q | 0.9323 | likely_pathogenic | 0.9775 | pathogenic | -1.646 | Destabilizing | 0.961 | D | 0.805 | deleterious | None | None | None | None | N |
A/R | 0.9573 | likely_pathogenic | 0.9884 | pathogenic | -1.473 | Destabilizing | 0.923 | D | 0.817 | deleterious | None | None | None | None | N |
A/S | 0.1708 | likely_benign | 0.2585 | benign | -2.089 | Highly Destabilizing | 0.565 | D | 0.685 | prob.neutral | D | 0.52205691 | None | None | N |
A/T | 0.0864 | likely_benign | 0.1621 | benign | -1.845 | Destabilizing | 0.008 | N | 0.433 | neutral | N | 0.503267325 | None | None | N |
A/V | 0.1594 | likely_benign | 0.2381 | benign | -0.552 | Destabilizing | 0.014 | N | 0.395 | neutral | N | 0.447376094 | None | None | N |
A/W | 0.9845 | likely_pathogenic | 0.9965 | pathogenic | -1.646 | Destabilizing | 0.996 | D | 0.883 | deleterious | None | None | None | None | N |
A/Y | 0.9439 | likely_pathogenic | 0.9838 | pathogenic | -1.168 | Destabilizing | 0.987 | D | 0.859 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.