Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32601 | 98026;98027;98028 | chr2:178540365;178540364;178540363 | chr2:179405092;179405091;179405090 |
N2AB | 30960 | 93103;93104;93105 | chr2:178540365;178540364;178540363 | chr2:179405092;179405091;179405090 |
N2A | 30033 | 90322;90323;90324 | chr2:178540365;178540364;178540363 | chr2:179405092;179405091;179405090 |
N2B | 23536 | 70831;70832;70833 | chr2:178540365;178540364;178540363 | chr2:179405092;179405091;179405090 |
Novex-1 | 23661 | 71206;71207;71208 | chr2:178540365;178540364;178540363 | chr2:179405092;179405091;179405090 |
Novex-2 | 23728 | 71407;71408;71409 | chr2:178540365;178540364;178540363 | chr2:179405092;179405091;179405090 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs745324961 | -0.109 | 1.0 | D | 0.856 | 0.485 | 0.815470345074 | gnomAD-2.1.1 | 8.13E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.8E-05 | 0 |
P/L | rs745324961 | -0.109 | 1.0 | D | 0.856 | 0.485 | 0.815470345074 | gnomAD-4.0.0 | 3.19649E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.74257E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.6457 | likely_pathogenic | 0.7174 | pathogenic | -1.168 | Destabilizing | 0.999 | D | 0.811 | deleterious | D | 0.548694692 | None | None | N |
P/C | 0.9549 | likely_pathogenic | 0.9655 | pathogenic | -1.935 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
P/D | 0.9985 | likely_pathogenic | 0.999 | pathogenic | -3.144 | Highly Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
P/E | 0.9953 | likely_pathogenic | 0.9969 | pathogenic | -3.107 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
P/F | 0.9981 | likely_pathogenic | 0.9989 | pathogenic | -1.002 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
P/G | 0.9791 | likely_pathogenic | 0.9864 | pathogenic | -1.45 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
P/H | 0.993 | likely_pathogenic | 0.9954 | pathogenic | -0.935 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
P/I | 0.9771 | likely_pathogenic | 0.9837 | pathogenic | -0.463 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
P/K | 0.9959 | likely_pathogenic | 0.9975 | pathogenic | -1.304 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
P/L | 0.9253 | likely_pathogenic | 0.9444 | pathogenic | -0.463 | Destabilizing | 1.0 | D | 0.856 | deleterious | D | 0.530083458 | None | None | N |
P/M | 0.9897 | likely_pathogenic | 0.9928 | pathogenic | -0.762 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
P/N | 0.998 | likely_pathogenic | 0.9986 | pathogenic | -1.649 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
P/Q | 0.9894 | likely_pathogenic | 0.9931 | pathogenic | -1.857 | Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.56122954 | None | None | N |
P/R | 0.9825 | likely_pathogenic | 0.9882 | pathogenic | -0.841 | Destabilizing | 1.0 | D | 0.836 | deleterious | D | 0.560722561 | None | None | N |
P/S | 0.9503 | likely_pathogenic | 0.9661 | pathogenic | -1.911 | Destabilizing | 1.0 | D | 0.79 | deleterious | N | 0.518980642 | None | None | N |
P/T | 0.9407 | likely_pathogenic | 0.9565 | pathogenic | -1.775 | Destabilizing | 1.0 | D | 0.799 | deleterious | D | 0.534224515 | None | None | N |
P/V | 0.9235 | likely_pathogenic | 0.9413 | pathogenic | -0.67 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
P/W | 0.9991 | likely_pathogenic | 0.9995 | pathogenic | -1.324 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
P/Y | 0.9982 | likely_pathogenic | 0.9989 | pathogenic | -0.928 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.