Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32610 | 98053;98054;98055 | chr2:178540338;178540337;178540336 | chr2:179405065;179405064;179405063 |
N2AB | 30969 | 93130;93131;93132 | chr2:178540338;178540337;178540336 | chr2:179405065;179405064;179405063 |
N2A | 30042 | 90349;90350;90351 | chr2:178540338;178540337;178540336 | chr2:179405065;179405064;179405063 |
N2B | 23545 | 70858;70859;70860 | chr2:178540338;178540337;178540336 | chr2:179405065;179405064;179405063 |
Novex-1 | 23670 | 71233;71234;71235 | chr2:178540338;178540337;178540336 | chr2:179405065;179405064;179405063 |
Novex-2 | 23737 | 71434;71435;71436 | chr2:178540338;178540337;178540336 | chr2:179405065;179405064;179405063 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.999 | N | 0.545 | 0.355 | 0.259272394797 | gnomAD-4.0.0 | 1.59197E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8599E-06 | 0 | 0 |
T/I | None | None | 1.0 | N | 0.799 | 0.424 | 0.52714902651 | gnomAD-4.0.0 | 1.59201E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85982E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2373 | likely_benign | 0.228 | benign | -0.575 | Destabilizing | 0.999 | D | 0.545 | neutral | N | 0.475714105 | None | None | N |
T/C | 0.6688 | likely_pathogenic | 0.6477 | pathogenic | -0.295 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
T/D | 0.9084 | likely_pathogenic | 0.8813 | pathogenic | -0.022 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
T/E | 0.8022 | likely_pathogenic | 0.7633 | pathogenic | -0.078 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
T/F | 0.6465 | likely_pathogenic | 0.6115 | pathogenic | -0.891 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
T/G | 0.701 | likely_pathogenic | 0.6729 | pathogenic | -0.756 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
T/H | 0.7632 | likely_pathogenic | 0.7243 | pathogenic | -1.046 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
T/I | 0.2951 | likely_benign | 0.281 | benign | -0.203 | Destabilizing | 1.0 | D | 0.799 | deleterious | N | 0.479980066 | None | None | N |
T/K | 0.5502 | ambiguous | 0.5178 | ambiguous | -0.516 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
T/L | 0.2021 | likely_benign | 0.1915 | benign | -0.203 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
T/M | 0.1358 | likely_benign | 0.1379 | benign | 0.128 | Stabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
T/N | 0.5537 | ambiguous | 0.4981 | ambiguous | -0.297 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | N | 0.496464933 | None | None | N |
T/P | 0.8132 | likely_pathogenic | 0.787 | pathogenic | -0.297 | Destabilizing | 1.0 | D | 0.807 | deleterious | N | 0.506442113 | None | None | N |
T/Q | 0.6408 | likely_pathogenic | 0.6058 | pathogenic | -0.567 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
T/R | 0.5227 | ambiguous | 0.4874 | ambiguous | -0.192 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
T/S | 0.3787 | ambiguous | 0.3534 | ambiguous | -0.558 | Destabilizing | 0.999 | D | 0.535 | neutral | N | 0.498276888 | None | None | N |
T/V | 0.1952 | likely_benign | 0.191 | benign | -0.297 | Destabilizing | 0.999 | D | 0.608 | neutral | None | None | None | None | N |
T/W | 0.8876 | likely_pathogenic | 0.8761 | pathogenic | -0.824 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
T/Y | 0.741 | likely_pathogenic | 0.705 | pathogenic | -0.58 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.