Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32625 | 98098;98099;98100 | chr2:178540293;178540292;178540291 | chr2:179405020;179405019;179405018 |
N2AB | 30984 | 93175;93176;93177 | chr2:178540293;178540292;178540291 | chr2:179405020;179405019;179405018 |
N2A | 30057 | 90394;90395;90396 | chr2:178540293;178540292;178540291 | chr2:179405020;179405019;179405018 |
N2B | 23560 | 70903;70904;70905 | chr2:178540293;178540292;178540291 | chr2:179405020;179405019;179405018 |
Novex-1 | 23685 | 71278;71279;71280 | chr2:178540293;178540292;178540291 | chr2:179405020;179405019;179405018 |
Novex-2 | 23752 | 71479;71480;71481 | chr2:178540293;178540292;178540291 | chr2:179405020;179405019;179405018 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 1.0 | N | 0.636 | 0.449 | 0.394536629495 | gnomAD-4.0.0 | 1.59127E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.119 | likely_benign | 0.1425 | benign | -0.17 | Destabilizing | 0.999 | D | 0.656 | neutral | N | 0.434748271 | None | None | N |
E/C | 0.7289 | likely_pathogenic | 0.7638 | pathogenic | -0.05 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
E/D | 0.1263 | likely_benign | 0.1318 | benign | -0.28 | Destabilizing | 0.999 | D | 0.548 | neutral | N | 0.437327217 | None | None | N |
E/F | 0.6398 | likely_pathogenic | 0.7125 | pathogenic | -0.163 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/G | 0.1539 | likely_benign | 0.1817 | benign | -0.326 | Destabilizing | 1.0 | D | 0.636 | neutral | N | 0.49385529 | None | None | N |
E/H | 0.3508 | ambiguous | 0.4403 | ambiguous | 0.234 | Stabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
E/I | 0.2703 | likely_benign | 0.3138 | benign | 0.193 | Stabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
E/K | 0.1045 | likely_benign | 0.1373 | benign | 0.41 | Stabilizing | 0.999 | D | 0.699 | prob.neutral | N | 0.431361249 | None | None | N |
E/L | 0.272 | likely_benign | 0.3409 | ambiguous | 0.193 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/M | 0.3646 | ambiguous | 0.42 | ambiguous | 0.125 | Stabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | N |
E/N | 0.2269 | likely_benign | 0.2633 | benign | 0.18 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
E/P | 0.3517 | ambiguous | 0.4538 | ambiguous | 0.092 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
E/Q | 0.1077 | likely_benign | 0.153 | benign | 0.191 | Stabilizing | 1.0 | D | 0.661 | neutral | N | 0.480944708 | None | None | N |
E/R | 0.1706 | likely_benign | 0.2283 | benign | 0.619 | Stabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
E/S | 0.1696 | likely_benign | 0.1979 | benign | 0.019 | Stabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/T | 0.1718 | likely_benign | 0.1999 | benign | 0.147 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/V | 0.1708 | likely_benign | 0.1975 | benign | 0.092 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | N | 0.474826812 | None | None | N |
E/W | 0.7627 | likely_pathogenic | 0.84 | pathogenic | -0.074 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
E/Y | 0.5127 | ambiguous | 0.5932 | pathogenic | 0.071 | Stabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.