Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32626 | 98101;98102;98103 | chr2:178540290;178540289;178540288 | chr2:179405017;179405016;179405015 |
N2AB | 30985 | 93178;93179;93180 | chr2:178540290;178540289;178540288 | chr2:179405017;179405016;179405015 |
N2A | 30058 | 90397;90398;90399 | chr2:178540290;178540289;178540288 | chr2:179405017;179405016;179405015 |
N2B | 23561 | 70906;70907;70908 | chr2:178540290;178540289;178540288 | chr2:179405017;179405016;179405015 |
Novex-1 | 23686 | 71281;71282;71283 | chr2:178540290;178540289;178540288 | chr2:179405017;179405016;179405015 |
Novex-2 | 23753 | 71482;71483;71484 | chr2:178540290;178540289;178540288 | chr2:179405017;179405016;179405015 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.003 | N | 0.197 | 0.201 | 0.185906805712 | gnomAD-4.0.0 | 6.00165E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56256E-06 | 0 | 0 |
D/Y | None | None | 0.957 | N | 0.604 | 0.494 | 0.489174143269 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1374 | likely_benign | 0.1513 | benign | -0.197 | Destabilizing | 0.505 | D | 0.493 | neutral | N | 0.519689523 | None | None | N |
D/C | 0.4475 | ambiguous | 0.4663 | ambiguous | 0.154 | Stabilizing | 0.991 | D | 0.673 | neutral | None | None | None | None | N |
D/E | 0.0888 | likely_benign | 0.0907 | benign | -0.319 | Destabilizing | 0.001 | N | 0.068 | neutral | N | 0.483824724 | None | None | N |
D/F | 0.3701 | ambiguous | 0.3926 | ambiguous | -0.275 | Destabilizing | 0.967 | D | 0.599 | neutral | None | None | None | None | N |
D/G | 0.1611 | likely_benign | 0.1779 | benign | -0.379 | Destabilizing | 0.338 | N | 0.414 | neutral | N | 0.466997011 | None | None | N |
D/H | 0.1978 | likely_benign | 0.219 | benign | -0.183 | Destabilizing | 0.782 | D | 0.447 | neutral | N | 0.501103762 | None | None | N |
D/I | 0.2106 | likely_benign | 0.2327 | benign | 0.225 | Stabilizing | 0.906 | D | 0.613 | neutral | None | None | None | None | N |
D/K | 0.2165 | likely_benign | 0.2358 | benign | 0.372 | Stabilizing | 0.404 | N | 0.421 | neutral | None | None | None | None | N |
D/L | 0.2557 | likely_benign | 0.2813 | benign | 0.225 | Stabilizing | 0.826 | D | 0.57 | neutral | None | None | None | None | N |
D/M | 0.3789 | ambiguous | 0.4059 | ambiguous | 0.394 | Stabilizing | 0.991 | D | 0.596 | neutral | None | None | None | None | N |
D/N | 0.0924 | likely_benign | 0.1001 | benign | 0.158 | Stabilizing | 0.003 | N | 0.197 | neutral | N | 0.486673028 | None | None | N |
D/P | 0.7477 | likely_pathogenic | 0.7926 | pathogenic | 0.106 | Stabilizing | 0.906 | D | 0.443 | neutral | None | None | None | None | N |
D/Q | 0.2126 | likely_benign | 0.2259 | benign | 0.171 | Stabilizing | 0.404 | N | 0.389 | neutral | None | None | None | None | N |
D/R | 0.262 | likely_benign | 0.2888 | benign | 0.457 | Stabilizing | 0.826 | D | 0.504 | neutral | None | None | None | None | N |
D/S | 0.1224 | likely_benign | 0.1312 | benign | 0.053 | Stabilizing | 0.404 | N | 0.329 | neutral | None | None | None | None | N |
D/T | 0.1598 | likely_benign | 0.1735 | benign | 0.19 | Stabilizing | 0.404 | N | 0.46 | neutral | None | None | None | None | N |
D/V | 0.1234 | likely_benign | 0.1389 | benign | 0.106 | Stabilizing | 0.879 | D | 0.571 | neutral | N | 0.464755285 | None | None | N |
D/W | 0.6939 | likely_pathogenic | 0.7061 | pathogenic | -0.196 | Destabilizing | 0.991 | D | 0.691 | prob.neutral | None | None | None | None | N |
D/Y | 0.1217 | likely_benign | 0.1293 | benign | -0.048 | Destabilizing | 0.957 | D | 0.604 | neutral | N | 0.415447648 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.