Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32642 | 98149;98150;98151 | chr2:178540242;178540241;178540240 | chr2:179404969;179404968;179404967 |
N2AB | 31001 | 93226;93227;93228 | chr2:178540242;178540241;178540240 | chr2:179404969;179404968;179404967 |
N2A | 30074 | 90445;90446;90447 | chr2:178540242;178540241;178540240 | chr2:179404969;179404968;179404967 |
N2B | 23577 | 70954;70955;70956 | chr2:178540242;178540241;178540240 | chr2:179404969;179404968;179404967 |
Novex-1 | 23702 | 71329;71330;71331 | chr2:178540242;178540241;178540240 | chr2:179404969;179404968;179404967 |
Novex-2 | 23769 | 71530;71531;71532 | chr2:178540242;178540241;178540240 | chr2:179404969;179404968;179404967 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1575367028 | None | 0.999 | N | 0.591 | 0.354 | 0.59360226722 | gnomAD-4.0.0 | 1.59116E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77254E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0919 | likely_benign | 0.0938 | benign | -1.336 | Destabilizing | 0.999 | D | 0.591 | neutral | N | 0.443637113 | None | None | N |
V/C | 0.7338 | likely_pathogenic | 0.7468 | pathogenic | -0.809 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | N |
V/D | 0.3063 | likely_benign | 0.3974 | ambiguous | -1.254 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
V/E | 0.2569 | likely_benign | 0.3065 | benign | -1.304 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | N | 0.44948565 | None | None | N |
V/F | 0.2851 | likely_benign | 0.3518 | ambiguous | -1.141 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
V/G | 0.1812 | likely_benign | 0.2081 | benign | -1.592 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | N | 0.488390755 | None | None | N |
V/H | 0.6367 | likely_pathogenic | 0.6891 | pathogenic | -1.088 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
V/I | 0.0866 | likely_benign | 0.0888 | benign | -0.754 | Destabilizing | 0.997 | D | 0.489 | neutral | N | 0.473498661 | None | None | N |
V/K | 0.3235 | likely_benign | 0.3723 | ambiguous | -1.187 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
V/L | 0.2318 | likely_benign | 0.2475 | benign | -0.754 | Destabilizing | 0.997 | D | 0.575 | neutral | N | 0.475498816 | None | None | N |
V/M | 0.1583 | likely_benign | 0.1815 | benign | -0.529 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/N | 0.2649 | likely_benign | 0.2904 | benign | -0.879 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/P | 0.2533 | likely_benign | 0.2763 | benign | -0.913 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
V/Q | 0.3478 | ambiguous | 0.375 | ambiguous | -1.128 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/R | 0.3412 | ambiguous | 0.4026 | ambiguous | -0.548 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/S | 0.165 | likely_benign | 0.1728 | benign | -1.306 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
V/T | 0.1102 | likely_benign | 0.1073 | benign | -1.262 | Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | N |
V/W | 0.8308 | likely_pathogenic | 0.8903 | pathogenic | -1.267 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
V/Y | 0.6357 | likely_pathogenic | 0.6996 | pathogenic | -1.018 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.