Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32644 | 98155;98156;98157 | chr2:178540236;178540235;178540234 | chr2:179404963;179404962;179404961 |
N2AB | 31003 | 93232;93233;93234 | chr2:178540236;178540235;178540234 | chr2:179404963;179404962;179404961 |
N2A | 30076 | 90451;90452;90453 | chr2:178540236;178540235;178540234 | chr2:179404963;179404962;179404961 |
N2B | 23579 | 70960;70961;70962 | chr2:178540236;178540235;178540234 | chr2:179404963;179404962;179404961 |
Novex-1 | 23704 | 71335;71336;71337 | chr2:178540236;178540235;178540234 | chr2:179404963;179404962;179404961 |
Novex-2 | 23771 | 71536;71537;71538 | chr2:178540236;178540235;178540234 | chr2:179404963;179404962;179404961 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs773841779 | -0.789 | 0.999 | N | 0.434 | 0.239 | 0.184867976434 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.22544E-04 | None | 0 | None | 0 | 0 | 0 |
Q/H | rs773841779 | -0.789 | 0.999 | N | 0.434 | 0.239 | 0.184867976434 | gnomAD-4.0.0 | 3.42098E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.25945E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2337 | likely_benign | 0.2404 | benign | -0.414 | Destabilizing | 0.997 | D | 0.329 | neutral | None | None | None | None | N |
Q/C | 0.5941 | likely_pathogenic | 0.65 | pathogenic | 0.3 | Stabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
Q/D | 0.364 | ambiguous | 0.4208 | ambiguous | -0.494 | Destabilizing | 0.997 | D | 0.321 | neutral | None | None | None | None | N |
Q/E | 0.1 | likely_benign | 0.1082 | benign | -0.473 | Destabilizing | 0.992 | D | 0.296 | neutral | N | 0.365786831 | None | None | N |
Q/F | 0.7628 | likely_pathogenic | 0.7947 | pathogenic | -0.319 | Destabilizing | 0.999 | D | 0.599 | neutral | None | None | None | None | N |
Q/G | 0.2646 | likely_benign | 0.3038 | benign | -0.701 | Destabilizing | 0.997 | D | 0.381 | neutral | None | None | None | None | N |
Q/H | 0.2715 | likely_benign | 0.3167 | benign | -0.729 | Destabilizing | 0.999 | D | 0.434 | neutral | N | 0.442575534 | None | None | N |
Q/I | 0.4978 | ambiguous | 0.5197 | ambiguous | 0.285 | Stabilizing | 0.999 | D | 0.593 | neutral | None | None | None | None | N |
Q/K | 0.135 | likely_benign | 0.159 | benign | -0.338 | Destabilizing | 0.997 | D | 0.297 | neutral | N | 0.449424148 | None | None | N |
Q/L | 0.1941 | likely_benign | 0.2124 | benign | 0.285 | Stabilizing | 0.997 | D | 0.381 | neutral | N | 0.488078537 | None | None | N |
Q/M | 0.3848 | ambiguous | 0.3886 | ambiguous | 0.769 | Stabilizing | 0.999 | D | 0.437 | neutral | None | None | None | None | N |
Q/N | 0.2906 | likely_benign | 0.3047 | benign | -0.574 | Destabilizing | 0.999 | D | 0.387 | neutral | None | None | None | None | N |
Q/P | 0.6887 | likely_pathogenic | 0.7719 | pathogenic | 0.082 | Stabilizing | 0.999 | D | 0.469 | neutral | N | 0.447962711 | None | None | N |
Q/R | 0.1383 | likely_benign | 0.1789 | benign | -0.208 | Destabilizing | 0.997 | D | 0.326 | neutral | N | 0.40640409 | None | None | N |
Q/S | 0.2304 | likely_benign | 0.2286 | benign | -0.589 | Destabilizing | 0.997 | D | 0.273 | neutral | None | None | None | None | N |
Q/T | 0.184 | likely_benign | 0.1908 | benign | -0.408 | Destabilizing | 0.999 | D | 0.416 | neutral | None | None | None | None | N |
Q/V | 0.3047 | likely_benign | 0.3339 | benign | 0.082 | Stabilizing | 0.999 | D | 0.444 | neutral | None | None | None | None | N |
Q/W | 0.6809 | likely_pathogenic | 0.7901 | pathogenic | -0.276 | Destabilizing | 1.0 | D | 0.587 | neutral | None | None | None | None | N |
Q/Y | 0.5513 | ambiguous | 0.6375 | pathogenic | -0.071 | Destabilizing | 0.999 | D | 0.444 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.