Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3266 | 10021;10022;10023 | chr2:178764719;178764718;178764717 | chr2:179629446;179629445;179629444 |
N2AB | 3266 | 10021;10022;10023 | chr2:178764719;178764718;178764717 | chr2:179629446;179629445;179629444 |
N2A | 3266 | 10021;10022;10023 | chr2:178764719;178764718;178764717 | chr2:179629446;179629445;179629444 |
N2B | 3220 | 9883;9884;9885 | chr2:178764719;178764718;178764717 | chr2:179629446;179629445;179629444 |
Novex-1 | 3220 | 9883;9884;9885 | chr2:178764719;178764718;178764717 | chr2:179629446;179629445;179629444 |
Novex-2 | 3220 | 9883;9884;9885 | chr2:178764719;178764718;178764717 | chr2:179629446;179629445;179629444 |
Novex-3 | 3266 | 10021;10022;10023 | chr2:178764719;178764718;178764717 | chr2:179629446;179629445;179629444 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 1.0 | D | 0.767 | 0.756 | 0.904293489814 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
P/S | rs2090043271 | None | 1.0 | D | 0.757 | 0.739 | 0.669000193909 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.9082 | likely_pathogenic | 0.9807 | pathogenic | -1.027 | Destabilizing | 1.0 | D | 0.754 | deleterious | D | 0.813362886 | None | None | I |
P/C | 0.9949 | likely_pathogenic | 0.9989 | pathogenic | -0.438 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
P/D | 0.9873 | likely_pathogenic | 0.9962 | pathogenic | -0.855 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
P/E | 0.9726 | likely_pathogenic | 0.9945 | pathogenic | -0.918 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
P/F | 0.9961 | likely_pathogenic | 0.9992 | pathogenic | -0.993 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
P/G | 0.9737 | likely_pathogenic | 0.9909 | pathogenic | -1.253 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
P/H | 0.9762 | likely_pathogenic | 0.9956 | pathogenic | -0.871 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
P/I | 0.9716 | likely_pathogenic | 0.9946 | pathogenic | -0.539 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
P/K | 0.9799 | likely_pathogenic | 0.9964 | pathogenic | -0.829 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | I |
P/L | 0.9204 | likely_pathogenic | 0.9853 | pathogenic | -0.539 | Destabilizing | 1.0 | D | 0.767 | deleterious | D | 0.829655399 | None | None | I |
P/M | 0.9791 | likely_pathogenic | 0.9964 | pathogenic | -0.348 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
P/N | 0.9843 | likely_pathogenic | 0.9956 | pathogenic | -0.432 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
P/Q | 0.9604 | likely_pathogenic | 0.9935 | pathogenic | -0.661 | Destabilizing | 1.0 | D | 0.784 | deleterious | D | 0.757994927 | None | None | I |
P/R | 0.9604 | likely_pathogenic | 0.9923 | pathogenic | -0.288 | Destabilizing | 1.0 | D | 0.791 | deleterious | D | 0.813827173 | None | None | I |
P/S | 0.9658 | likely_pathogenic | 0.994 | pathogenic | -0.81 | Destabilizing | 1.0 | D | 0.757 | deleterious | D | 0.756798279 | None | None | I |
P/T | 0.9242 | likely_pathogenic | 0.9868 | pathogenic | -0.778 | Destabilizing | 1.0 | D | 0.755 | deleterious | D | 0.779214241 | None | None | I |
P/V | 0.9444 | likely_pathogenic | 0.9868 | pathogenic | -0.667 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
P/W | 0.9975 | likely_pathogenic | 0.9995 | pathogenic | -1.134 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
P/Y | 0.9932 | likely_pathogenic | 0.9984 | pathogenic | -0.858 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.