Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32661 | 98206;98207;98208 | chr2:178540185;178540184;178540183 | chr2:179404912;179404911;179404910 |
N2AB | 31020 | 93283;93284;93285 | chr2:178540185;178540184;178540183 | chr2:179404912;179404911;179404910 |
N2A | 30093 | 90502;90503;90504 | chr2:178540185;178540184;178540183 | chr2:179404912;179404911;179404910 |
N2B | 23596 | 71011;71012;71013 | chr2:178540185;178540184;178540183 | chr2:179404912;179404911;179404910 |
Novex-1 | 23721 | 71386;71387;71388 | chr2:178540185;178540184;178540183 | chr2:179404912;179404911;179404910 |
Novex-2 | 23788 | 71587;71588;71589 | chr2:178540185;178540184;178540183 | chr2:179404912;179404911;179404910 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1427043562 | None | 1.0 | N | 0.836 | 0.429 | 0.60179161069 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs1427043562 | None | 1.0 | N | 0.836 | 0.429 | 0.60179161069 | gnomAD-4.0.0 | 6.57324E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47016E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.3163 | likely_benign | 0.317 | benign | -0.77 | Destabilizing | 0.999 | D | 0.557 | neutral | N | 0.492038069 | None | None | N |
T/C | 0.6862 | likely_pathogenic | 0.6665 | pathogenic | -0.438 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
T/D | 0.8874 | likely_pathogenic | 0.8884 | pathogenic | 0.479 | Stabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
T/E | 0.7859 | likely_pathogenic | 0.8032 | pathogenic | 0.452 | Stabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
T/F | 0.7222 | likely_pathogenic | 0.6879 | pathogenic | -1.113 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
T/G | 0.786 | likely_pathogenic | 0.7574 | pathogenic | -0.96 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
T/H | 0.6356 | likely_pathogenic | 0.6213 | pathogenic | -1.194 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
T/I | 0.3564 | ambiguous | 0.3333 | benign | -0.372 | Destabilizing | 1.0 | D | 0.836 | deleterious | N | 0.502064475 | None | None | N |
T/K | 0.6388 | likely_pathogenic | 0.6324 | pathogenic | -0.376 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
T/L | 0.2659 | likely_benign | 0.2497 | benign | -0.372 | Destabilizing | 0.999 | D | 0.692 | prob.neutral | None | None | None | None | N |
T/M | 0.2036 | likely_benign | 0.206 | benign | -0.169 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
T/N | 0.4863 | ambiguous | 0.4793 | ambiguous | -0.263 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | N | 0.485935229 | None | None | N |
T/P | 0.6982 | likely_pathogenic | 0.664 | pathogenic | -0.475 | Destabilizing | 1.0 | D | 0.842 | deleterious | N | 0.487456167 | None | None | N |
T/Q | 0.5501 | ambiguous | 0.5472 | ambiguous | -0.408 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
T/R | 0.5679 | likely_pathogenic | 0.5537 | ambiguous | -0.187 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
T/S | 0.3829 | ambiguous | 0.3682 | ambiguous | -0.611 | Destabilizing | 0.999 | D | 0.526 | neutral | N | 0.486593566 | None | None | N |
T/V | 0.2182 | likely_benign | 0.2115 | benign | -0.475 | Destabilizing | 0.999 | D | 0.594 | neutral | None | None | None | None | N |
T/W | 0.9294 | likely_pathogenic | 0.9282 | pathogenic | -1.038 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
T/Y | 0.7623 | likely_pathogenic | 0.7426 | pathogenic | -0.78 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.