Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32670 | 98233;98234;98235 | chr2:178540158;178540157;178540156 | chr2:179404885;179404884;179404883 |
N2AB | 31029 | 93310;93311;93312 | chr2:178540158;178540157;178540156 | chr2:179404885;179404884;179404883 |
N2A | 30102 | 90529;90530;90531 | chr2:178540158;178540157;178540156 | chr2:179404885;179404884;179404883 |
N2B | 23605 | 71038;71039;71040 | chr2:178540158;178540157;178540156 | chr2:179404885;179404884;179404883 |
Novex-1 | 23730 | 71413;71414;71415 | chr2:178540158;178540157;178540156 | chr2:179404885;179404884;179404883 |
Novex-2 | 23797 | 71614;71615;71616 | chr2:178540158;178540157;178540156 | chr2:179404885;179404884;179404883 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1693724796 | None | 0.999 | N | 0.589 | 0.419 | 0.393775345888 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06954E-04 | 0 |
E/K | rs1693724796 | None | 0.999 | N | 0.589 | 0.419 | 0.393775345888 | gnomAD-4.0.0 | 6.57203E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.06954E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.201 | likely_benign | 0.2359 | benign | -0.837 | Destabilizing | 0.999 | D | 0.702 | prob.neutral | N | 0.474219621 | None | None | N |
E/C | 0.8698 | likely_pathogenic | 0.8759 | pathogenic | -0.444 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
E/D | 0.3154 | likely_benign | 0.3301 | benign | -1.067 | Destabilizing | 0.999 | D | 0.478 | neutral | N | 0.514614564 | None | None | N |
E/F | 0.84 | likely_pathogenic | 0.852 | pathogenic | -0.094 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
E/G | 0.3735 | ambiguous | 0.4438 | ambiguous | -1.227 | Destabilizing | 1.0 | D | 0.757 | deleterious | N | 0.48929891 | None | None | N |
E/H | 0.7057 | likely_pathogenic | 0.7436 | pathogenic | -0.277 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/I | 0.4197 | ambiguous | 0.4235 | ambiguous | 0.236 | Stabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
E/K | 0.3014 | likely_benign | 0.3947 | ambiguous | -0.5 | Destabilizing | 0.999 | D | 0.589 | neutral | N | 0.482328788 | None | None | N |
E/L | 0.5119 | ambiguous | 0.5347 | ambiguous | 0.236 | Stabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
E/M | 0.5117 | ambiguous | 0.53 | ambiguous | 0.641 | Stabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
E/N | 0.4476 | ambiguous | 0.4736 | ambiguous | -1.107 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/P | 0.7683 | likely_pathogenic | 0.8119 | pathogenic | -0.1 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
E/Q | 0.2146 | likely_benign | 0.242 | benign | -0.946 | Destabilizing | 1.0 | D | 0.617 | neutral | N | 0.468597308 | None | None | N |
E/R | 0.5054 | ambiguous | 0.5957 | pathogenic | -0.166 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
E/S | 0.2896 | likely_benign | 0.3198 | benign | -1.425 | Destabilizing | 0.999 | D | 0.65 | neutral | None | None | None | None | N |
E/T | 0.243 | likely_benign | 0.2679 | benign | -1.091 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
E/V | 0.2407 | likely_benign | 0.2499 | benign | -0.1 | Destabilizing | 1.0 | D | 0.781 | deleterious | N | 0.480171104 | None | None | N |
E/W | 0.948 | likely_pathogenic | 0.959 | pathogenic | 0.22 | Stabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
E/Y | 0.7897 | likely_pathogenic | 0.8189 | pathogenic | 0.19 | Stabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.