Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32672 | 98239;98240;98241 | chr2:178540152;178540151;178540150 | chr2:179404879;179404878;179404877 |
N2AB | 31031 | 93316;93317;93318 | chr2:178540152;178540151;178540150 | chr2:179404879;179404878;179404877 |
N2A | 30104 | 90535;90536;90537 | chr2:178540152;178540151;178540150 | chr2:179404879;179404878;179404877 |
N2B | 23607 | 71044;71045;71046 | chr2:178540152;178540151;178540150 | chr2:179404879;179404878;179404877 |
Novex-1 | 23732 | 71419;71420;71421 | chr2:178540152;178540151;178540150 | chr2:179404879;179404878;179404877 |
Novex-2 | 23799 | 71620;71621;71622 | chr2:178540152;178540151;178540150 | chr2:179404879;179404878;179404877 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | None | None | 0.961 | N | 0.574 | 0.337 | 0.326616659874 | gnomAD-4.0.0 | 1.59145E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85887E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.508 | ambiguous | 0.6131 | pathogenic | -1.682 | Destabilizing | 0.931 | D | 0.577 | neutral | None | None | None | None | N |
R/C | 0.1452 | likely_benign | 0.1887 | benign | -1.594 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
R/D | 0.7917 | likely_pathogenic | 0.8721 | pathogenic | -0.516 | Destabilizing | 0.996 | D | 0.671 | neutral | None | None | None | None | N |
R/E | 0.4783 | ambiguous | 0.5988 | pathogenic | -0.306 | Destabilizing | 0.97 | D | 0.585 | neutral | None | None | None | None | N |
R/F | 0.5657 | likely_pathogenic | 0.6446 | pathogenic | -0.958 | Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
R/G | 0.4675 | ambiguous | 0.6271 | pathogenic | -2.058 | Highly Destabilizing | 0.98 | D | 0.584 | neutral | N | 0.493988576 | None | None | N |
R/H | 0.0936 | likely_benign | 0.1142 | benign | -1.897 | Destabilizing | 0.999 | D | 0.618 | neutral | None | None | None | None | N |
R/I | 0.2643 | likely_benign | 0.3138 | benign | -0.608 | Destabilizing | 0.999 | D | 0.742 | deleterious | None | None | None | None | N |
R/K | 0.0917 | likely_benign | 0.1079 | benign | -1.236 | Destabilizing | 0.122 | N | 0.291 | neutral | N | 0.391322781 | None | None | N |
R/L | 0.2353 | likely_benign | 0.2874 | benign | -0.608 | Destabilizing | 0.985 | D | 0.584 | neutral | None | None | None | None | N |
R/M | 0.3109 | likely_benign | 0.3842 | ambiguous | -1.058 | Destabilizing | 1.0 | D | 0.669 | neutral | N | 0.462820307 | None | None | N |
R/N | 0.5717 | likely_pathogenic | 0.6719 | pathogenic | -1.069 | Destabilizing | 0.985 | D | 0.559 | neutral | None | None | None | None | N |
R/P | 0.9762 | likely_pathogenic | 0.9862 | pathogenic | -0.951 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
R/Q | 0.1057 | likely_benign | 0.1298 | benign | -1.037 | Destabilizing | 0.97 | D | 0.586 | neutral | None | None | None | None | N |
R/S | 0.5152 | ambiguous | 0.6324 | pathogenic | -2.032 | Highly Destabilizing | 0.961 | D | 0.574 | neutral | N | 0.41800795 | None | None | N |
R/T | 0.2745 | likely_benign | 0.3542 | ambiguous | -1.597 | Destabilizing | 0.98 | D | 0.569 | neutral | N | 0.425317925 | None | None | N |
R/V | 0.3312 | likely_benign | 0.3929 | ambiguous | -0.951 | Destabilizing | 0.996 | D | 0.693 | prob.neutral | None | None | None | None | N |
R/W | 0.2526 | likely_benign | 0.3243 | benign | -0.4 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | N | 0.48535045 | None | None | N |
R/Y | 0.3966 | ambiguous | 0.4873 | ambiguous | -0.258 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.