Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32676 | 98251;98252;98253 | chr2:178540140;178540139;178540138 | chr2:179404867;179404866;179404865 |
N2AB | 31035 | 93328;93329;93330 | chr2:178540140;178540139;178540138 | chr2:179404867;179404866;179404865 |
N2A | 30108 | 90547;90548;90549 | chr2:178540140;178540139;178540138 | chr2:179404867;179404866;179404865 |
N2B | 23611 | 71056;71057;71058 | chr2:178540140;178540139;178540138 | chr2:179404867;179404866;179404865 |
Novex-1 | 23736 | 71431;71432;71433 | chr2:178540140;178540139;178540138 | chr2:179404867;179404866;179404865 |
Novex-2 | 23803 | 71632;71633;71634 | chr2:178540140;178540139;178540138 | chr2:179404867;179404866;179404865 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.013 | N | 0.489 | 0.081 | 0.33835085245 | gnomAD-4.0.0 | 1.36894E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31949E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2759 | likely_benign | 0.2756 | benign | -2.795 | Highly Destabilizing | 0.404 | N | 0.714 | prob.delet. | None | None | None | None | N |
L/C | 0.4318 | ambiguous | 0.4429 | ambiguous | -2.03 | Highly Destabilizing | 0.991 | D | 0.769 | deleterious | None | None | None | None | N |
L/D | 0.883 | likely_pathogenic | 0.9073 | pathogenic | -3.277 | Highly Destabilizing | 0.906 | D | 0.862 | deleterious | None | None | None | None | N |
L/E | 0.4967 | ambiguous | 0.5434 | ambiguous | -3.117 | Highly Destabilizing | 0.906 | D | 0.831 | deleterious | None | None | None | None | N |
L/F | 0.1503 | likely_benign | 0.1725 | benign | -1.656 | Destabilizing | 0.826 | D | 0.736 | prob.delet. | None | None | None | None | N |
L/G | 0.6825 | likely_pathogenic | 0.6975 | pathogenic | -3.253 | Highly Destabilizing | 0.906 | D | 0.825 | deleterious | None | None | None | None | N |
L/H | 0.2696 | likely_benign | 0.3145 | benign | -2.595 | Highly Destabilizing | 0.991 | D | 0.823 | deleterious | None | None | None | None | N |
L/I | 0.0987 | likely_benign | 0.0976 | benign | -1.479 | Destabilizing | 0.013 | N | 0.489 | neutral | N | 0.430361172 | None | None | N |
L/K | 0.2902 | likely_benign | 0.3701 | ambiguous | -2.255 | Highly Destabilizing | 0.826 | D | 0.786 | deleterious | None | None | None | None | N |
L/M | 0.0831 | likely_benign | 0.0809 | benign | -1.384 | Destabilizing | 0.04 | N | 0.462 | neutral | None | None | None | None | N |
L/N | 0.5491 | ambiguous | 0.5731 | pathogenic | -2.44 | Highly Destabilizing | 0.906 | D | 0.865 | deleterious | None | None | None | None | N |
L/P | 0.9804 | likely_pathogenic | 0.9851 | pathogenic | -1.9 | Destabilizing | 0.957 | D | 0.861 | deleterious | N | 0.520385743 | None | None | N |
L/Q | 0.175 | likely_benign | 0.1938 | benign | -2.413 | Highly Destabilizing | 0.782 | D | 0.829 | deleterious | N | 0.459102424 | None | None | N |
L/R | 0.2279 | likely_benign | 0.2953 | benign | -1.75 | Destabilizing | 0.782 | D | 0.807 | deleterious | N | 0.401056985 | None | None | N |
L/S | 0.2909 | likely_benign | 0.2862 | benign | -3.036 | Highly Destabilizing | 0.826 | D | 0.751 | deleterious | None | None | None | None | N |
L/T | 0.1751 | likely_benign | 0.1777 | benign | -2.764 | Highly Destabilizing | 0.826 | D | 0.76 | deleterious | None | None | None | None | N |
L/V | 0.0931 | likely_benign | 0.0956 | benign | -1.9 | Destabilizing | 0.013 | N | 0.505 | neutral | N | 0.427955585 | None | None | N |
L/W | 0.3217 | likely_benign | 0.3931 | ambiguous | -2.031 | Highly Destabilizing | 0.991 | D | 0.775 | deleterious | None | None | None | None | N |
L/Y | 0.3576 | ambiguous | 0.4126 | ambiguous | -1.856 | Destabilizing | 0.906 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.