Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3270 | 10033;10034;10035 | chr2:178764707;178764706;178764705 | chr2:179629434;179629433;179629432 |
N2AB | 3270 | 10033;10034;10035 | chr2:178764707;178764706;178764705 | chr2:179629434;179629433;179629432 |
N2A | 3270 | 10033;10034;10035 | chr2:178764707;178764706;178764705 | chr2:179629434;179629433;179629432 |
N2B | 3224 | 9895;9896;9897 | chr2:178764707;178764706;178764705 | chr2:179629434;179629433;179629432 |
Novex-1 | 3224 | 9895;9896;9897 | chr2:178764707;178764706;178764705 | chr2:179629434;179629433;179629432 |
Novex-2 | 3224 | 9895;9896;9897 | chr2:178764707;178764706;178764705 | chr2:179629434;179629433;179629432 |
Novex-3 | 3270 | 10033;10034;10035 | chr2:178764707;178764706;178764705 | chr2:179629434;179629433;179629432 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs1447409995 | -0.808 | 0.901 | D | 0.697 | 0.472 | 0.651879210792 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.83E-06 | 0 |
I/T | None | None | 0.722 | D | 0.716 | 0.603 | 0.74021432234 | gnomAD-4.0.0 | 1.36815E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99302E-07 | 1.15934E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8448 | likely_pathogenic | 0.943 | pathogenic | -2.237 | Highly Destabilizing | 0.415 | N | 0.71 | prob.delet. | None | None | None | None | N |
I/C | 0.9088 | likely_pathogenic | 0.9703 | pathogenic | -1.301 | Destabilizing | 0.996 | D | 0.751 | deleterious | None | None | None | None | N |
I/D | 0.9902 | likely_pathogenic | 0.9984 | pathogenic | -1.903 | Destabilizing | 0.987 | D | 0.846 | deleterious | None | None | None | None | N |
I/E | 0.9782 | likely_pathogenic | 0.9958 | pathogenic | -1.753 | Destabilizing | 0.961 | D | 0.82 | deleterious | None | None | None | None | N |
I/F | 0.4257 | ambiguous | 0.6598 | pathogenic | -1.412 | Destabilizing | 0.901 | D | 0.701 | prob.neutral | D | 0.593914605 | None | None | N |
I/G | 0.9691 | likely_pathogenic | 0.9923 | pathogenic | -2.685 | Highly Destabilizing | 0.961 | D | 0.796 | deleterious | None | None | None | None | N |
I/H | 0.9615 | likely_pathogenic | 0.9933 | pathogenic | -1.83 | Destabilizing | 0.996 | D | 0.829 | deleterious | None | None | None | None | N |
I/K | 0.9471 | likely_pathogenic | 0.9909 | pathogenic | -1.501 | Destabilizing | 0.961 | D | 0.825 | deleterious | None | None | None | None | N |
I/L | 0.2672 | likely_benign | 0.4188 | ambiguous | -0.983 | Destabilizing | 0.19 | N | 0.443 | neutral | N | 0.5190928 | None | None | N |
I/M | 0.2867 | likely_benign | 0.4731 | ambiguous | -0.806 | Destabilizing | 0.901 | D | 0.697 | prob.neutral | D | 0.664873953 | None | None | N |
I/N | 0.8893 | likely_pathogenic | 0.9744 | pathogenic | -1.556 | Destabilizing | 0.983 | D | 0.846 | deleterious | D | 0.741566061 | None | None | N |
I/P | 0.9321 | likely_pathogenic | 0.9769 | pathogenic | -1.379 | Destabilizing | 0.987 | D | 0.848 | deleterious | None | None | None | None | N |
I/Q | 0.9603 | likely_pathogenic | 0.9925 | pathogenic | -1.547 | Destabilizing | 0.987 | D | 0.841 | deleterious | None | None | None | None | N |
I/R | 0.9241 | likely_pathogenic | 0.9869 | pathogenic | -1.111 | Destabilizing | 0.961 | D | 0.845 | deleterious | None | None | None | None | N |
I/S | 0.8946 | likely_pathogenic | 0.9707 | pathogenic | -2.248 | Highly Destabilizing | 0.901 | D | 0.804 | deleterious | D | 0.68082589 | None | None | N |
I/T | 0.7874 | likely_pathogenic | 0.9316 | pathogenic | -1.956 | Destabilizing | 0.722 | D | 0.716 | prob.delet. | D | 0.625607772 | None | None | N |
I/V | 0.0841 | likely_benign | 0.1198 | benign | -1.379 | Destabilizing | 0.001 | N | 0.257 | neutral | N | 0.435856265 | None | None | N |
I/W | 0.9695 | likely_pathogenic | 0.9929 | pathogenic | -1.575 | Destabilizing | 0.996 | D | 0.83 | deleterious | None | None | None | None | N |
I/Y | 0.875 | likely_pathogenic | 0.9631 | pathogenic | -1.338 | Destabilizing | 0.961 | D | 0.764 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.