Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32710 | 98353;98354;98355 | chr2:178539937;178539936;178539935 | chr2:179404664;179404663;179404662 |
N2AB | 31069 | 93430;93431;93432 | chr2:178539937;178539936;178539935 | chr2:179404664;179404663;179404662 |
N2A | 30142 | 90649;90650;90651 | chr2:178539937;178539936;178539935 | chr2:179404664;179404663;179404662 |
N2B | 23645 | 71158;71159;71160 | chr2:178539937;178539936;178539935 | chr2:179404664;179404663;179404662 |
Novex-1 | 23770 | 71533;71534;71535 | chr2:178539937;178539936;178539935 | chr2:179404664;179404663;179404662 |
Novex-2 | 23837 | 71734;71735;71736 | chr2:178539937;178539936;178539935 | chr2:179404664;179404663;179404662 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | None | None | 1.0 | D | 0.677 | 0.459 | 0.530160902827 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8083 | likely_pathogenic | 0.7804 | pathogenic | -2.147 | Highly Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | I |
Y/C | 0.2858 | likely_benign | 0.2787 | benign | -1.298 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | D | 0.531611175 | None | None | I |
Y/D | 0.7229 | likely_pathogenic | 0.6978 | pathogenic | -0.849 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | D | 0.531611175 | None | None | I |
Y/E | 0.8992 | likely_pathogenic | 0.8875 | pathogenic | -0.724 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
Y/F | 0.1319 | likely_benign | 0.1208 | benign | -0.755 | Destabilizing | 0.999 | D | 0.631 | neutral | N | 0.448512576 | None | None | I |
Y/G | 0.7327 | likely_pathogenic | 0.7217 | pathogenic | -2.498 | Highly Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
Y/H | 0.4314 | ambiguous | 0.43 | ambiguous | -1.029 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | D | 0.531611175 | None | None | I |
Y/I | 0.6439 | likely_pathogenic | 0.6011 | pathogenic | -1.071 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
Y/K | 0.8794 | likely_pathogenic | 0.8701 | pathogenic | -1.435 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
Y/L | 0.4785 | ambiguous | 0.4385 | ambiguous | -1.071 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | None | None | None | None | I |
Y/M | 0.717 | likely_pathogenic | 0.6723 | pathogenic | -0.974 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
Y/N | 0.4564 | ambiguous | 0.4438 | ambiguous | -1.906 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | D | 0.531264459 | None | None | I |
Y/P | 0.9372 | likely_pathogenic | 0.9277 | pathogenic | -1.427 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
Y/Q | 0.808 | likely_pathogenic | 0.7963 | pathogenic | -1.685 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
Y/R | 0.8156 | likely_pathogenic | 0.8089 | pathogenic | -1.199 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
Y/S | 0.5743 | likely_pathogenic | 0.5466 | ambiguous | -2.437 | Highly Destabilizing | 1.0 | D | 0.695 | prob.neutral | N | 0.511985265 | None | None | I |
Y/T | 0.7775 | likely_pathogenic | 0.7447 | pathogenic | -2.202 | Highly Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | I |
Y/V | 0.597 | likely_pathogenic | 0.5582 | ambiguous | -1.427 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | I |
Y/W | 0.5229 | ambiguous | 0.4726 | ambiguous | -0.336 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.