Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32716 | 98371;98372;98373 | chr2:178539919;178539918;178539917 | chr2:179404646;179404645;179404644 |
N2AB | 31075 | 93448;93449;93450 | chr2:178539919;178539918;178539917 | chr2:179404646;179404645;179404644 |
N2A | 30148 | 90667;90668;90669 | chr2:178539919;178539918;178539917 | chr2:179404646;179404645;179404644 |
N2B | 23651 | 71176;71177;71178 | chr2:178539919;178539918;178539917 | chr2:179404646;179404645;179404644 |
Novex-1 | 23776 | 71551;71552;71553 | chr2:178539919;178539918;178539917 | chr2:179404646;179404645;179404644 |
Novex-2 | 23843 | 71752;71753;71754 | chr2:178539919;178539918;178539917 | chr2:179404646;179404645;179404644 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.999 | N | 0.497 | 0.577 | 0.737036055105 | gnomAD-4.0.0 | 1.59128E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85838E-06 | 0 | 0 |
V/I | None | None | 0.997 | D | 0.502 | 0.372 | 0.748681091053 | gnomAD-4.0.0 | 1.59133E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85843E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5851 | likely_pathogenic | 0.5064 | ambiguous | -1.61 | Destabilizing | 0.999 | D | 0.497 | neutral | N | 0.520055748 | None | None | N |
V/C | 0.8302 | likely_pathogenic | 0.8141 | pathogenic | -1.169 | Destabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | N |
V/D | 0.9737 | likely_pathogenic | 0.9614 | pathogenic | -1.531 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
V/E | 0.9059 | likely_pathogenic | 0.8716 | pathogenic | -1.448 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | D | 0.52448323 | None | None | N |
V/F | 0.5381 | ambiguous | 0.4943 | ambiguous | -1.037 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
V/G | 0.7392 | likely_pathogenic | 0.7001 | pathogenic | -2.01 | Highly Destabilizing | 1.0 | D | 0.721 | prob.delet. | D | 0.535586046 | None | None | N |
V/H | 0.9582 | likely_pathogenic | 0.9409 | pathogenic | -1.605 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
V/I | 0.112 | likely_benign | 0.1067 | benign | -0.574 | Destabilizing | 0.997 | D | 0.502 | neutral | D | 0.536467996 | None | None | N |
V/K | 0.9263 | likely_pathogenic | 0.8954 | pathogenic | -1.399 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
V/L | 0.4932 | ambiguous | 0.4657 | ambiguous | -0.574 | Destabilizing | 0.997 | D | 0.517 | neutral | N | 0.489512034 | None | None | N |
V/M | 0.519 | ambiguous | 0.46 | ambiguous | -0.531 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
V/N | 0.9393 | likely_pathogenic | 0.9144 | pathogenic | -1.372 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
V/P | 0.9746 | likely_pathogenic | 0.968 | pathogenic | -0.886 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
V/Q | 0.8494 | likely_pathogenic | 0.8077 | pathogenic | -1.411 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/R | 0.8791 | likely_pathogenic | 0.8385 | pathogenic | -1.019 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/S | 0.7754 | likely_pathogenic | 0.7093 | pathogenic | -1.964 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/T | 0.6518 | likely_pathogenic | 0.5686 | pathogenic | -1.76 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
V/W | 0.9803 | likely_pathogenic | 0.9742 | pathogenic | -1.355 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
V/Y | 0.9183 | likely_pathogenic | 0.894 | pathogenic | -1.009 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.