Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32741 | 98446;98447;98448 | chr2:178539844;178539843;178539842 | chr2:179404571;179404570;179404569 |
N2AB | 31100 | 93523;93524;93525 | chr2:178539844;178539843;178539842 | chr2:179404571;179404570;179404569 |
N2A | 30173 | 90742;90743;90744 | chr2:178539844;178539843;178539842 | chr2:179404571;179404570;179404569 |
N2B | 23676 | 71251;71252;71253 | chr2:178539844;178539843;178539842 | chr2:179404571;179404570;179404569 |
Novex-1 | 23801 | 71626;71627;71628 | chr2:178539844;178539843;178539842 | chr2:179404571;179404570;179404569 |
Novex-2 | 23868 | 71827;71828;71829 | chr2:178539844;178539843;178539842 | chr2:179404571;179404570;179404569 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1693522689 | None | 0.822 | N | 0.521 | 0.255 | 0.215869574891 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1693522689 | None | 0.822 | N | 0.521 | 0.255 | 0.215869574891 | gnomAD-4.0.0 | 2.56216E-06 | None | None | None | None | N | None | 0 | 1.69515E-05 | None | 0 | 0 | None | 0 | 0 | 2.39294E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1727 | likely_benign | 0.1815 | benign | -0.581 | Destabilizing | 0.822 | D | 0.551 | neutral | N | 0.479450693 | None | None | N |
E/C | 0.8219 | likely_pathogenic | 0.8298 | pathogenic | 0.038 | Stabilizing | 0.998 | D | 0.676 | prob.neutral | None | None | None | None | N |
E/D | 0.0979 | likely_benign | 0.0961 | benign | -0.365 | Destabilizing | 0.002 | N | 0.218 | neutral | N | 0.385188164 | None | None | N |
E/F | 0.8363 | likely_pathogenic | 0.8442 | pathogenic | -0.502 | Destabilizing | 0.993 | D | 0.637 | neutral | None | None | None | None | N |
E/G | 0.1268 | likely_benign | 0.1313 | benign | -0.8 | Destabilizing | 0.822 | D | 0.579 | neutral | N | 0.460054069 | None | None | N |
E/H | 0.6288 | likely_pathogenic | 0.6579 | pathogenic | -0.503 | Destabilizing | 0.993 | D | 0.441 | neutral | None | None | None | None | N |
E/I | 0.656 | likely_pathogenic | 0.6825 | pathogenic | -0.03 | Destabilizing | 0.978 | D | 0.635 | neutral | None | None | None | None | N |
E/K | 0.3135 | likely_benign | 0.3341 | benign | 0.266 | Stabilizing | 0.822 | D | 0.521 | neutral | N | 0.482336282 | None | None | N |
E/L | 0.5583 | ambiguous | 0.5782 | pathogenic | -0.03 | Destabilizing | 0.978 | D | 0.617 | neutral | None | None | None | None | N |
E/M | 0.601 | likely_pathogenic | 0.6205 | pathogenic | 0.289 | Stabilizing | 0.998 | D | 0.607 | neutral | None | None | None | None | N |
E/N | 0.2174 | likely_benign | 0.2286 | benign | -0.058 | Destabilizing | 0.754 | D | 0.485 | neutral | None | None | None | None | N |
E/P | 0.8852 | likely_pathogenic | 0.9197 | pathogenic | -0.194 | Destabilizing | 0.978 | D | 0.468 | neutral | None | None | None | None | N |
E/Q | 0.2163 | likely_benign | 0.2289 | benign | -0.018 | Destabilizing | 0.904 | D | 0.457 | neutral | N | 0.452565016 | None | None | N |
E/R | 0.4223 | ambiguous | 0.4433 | ambiguous | 0.358 | Stabilizing | 0.978 | D | 0.447 | neutral | None | None | None | None | N |
E/S | 0.2358 | likely_benign | 0.2465 | benign | -0.241 | Destabilizing | 0.86 | D | 0.506 | neutral | None | None | None | None | N |
E/T | 0.3924 | ambiguous | 0.4238 | ambiguous | -0.058 | Destabilizing | 0.86 | D | 0.503 | neutral | None | None | None | None | N |
E/V | 0.4111 | ambiguous | 0.4388 | ambiguous | -0.194 | Destabilizing | 0.97 | D | 0.542 | neutral | N | 0.502231552 | None | None | N |
E/W | 0.9244 | likely_pathogenic | 0.9346 | pathogenic | -0.336 | Destabilizing | 0.998 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/Y | 0.6661 | likely_pathogenic | 0.696 | pathogenic | -0.256 | Destabilizing | 0.993 | D | 0.596 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.