Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32749 | 98470;98471;98472 | chr2:178539820;178539819;178539818 | chr2:179404547;179404546;179404545 |
N2AB | 31108 | 93547;93548;93549 | chr2:178539820;178539819;178539818 | chr2:179404547;179404546;179404545 |
N2A | 30181 | 90766;90767;90768 | chr2:178539820;178539819;178539818 | chr2:179404547;179404546;179404545 |
N2B | 23684 | 71275;71276;71277 | chr2:178539820;178539819;178539818 | chr2:179404547;179404546;179404545 |
Novex-1 | 23809 | 71650;71651;71652 | chr2:178539820;178539819;178539818 | chr2:179404547;179404546;179404545 |
Novex-2 | 23876 | 71851;71852;71853 | chr2:178539820;178539819;178539818 | chr2:179404547;179404546;179404545 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1693506739 | None | 1.0 | N | 0.704 | 0.317 | 0.542675667512 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6632 | likely_pathogenic | 0.675 | pathogenic | -0.924 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
A/D | 0.972 | likely_pathogenic | 0.9768 | pathogenic | -1.375 | Destabilizing | 1.0 | D | 0.78 | deleterious | D | 0.530384598 | None | None | N |
A/E | 0.9621 | likely_pathogenic | 0.9645 | pathogenic | -1.344 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
A/F | 0.8753 | likely_pathogenic | 0.8873 | pathogenic | -0.82 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
A/G | 0.2585 | likely_benign | 0.2558 | benign | -1.144 | Destabilizing | 1.0 | D | 0.568 | neutral | N | 0.501947203 | None | None | N |
A/H | 0.9683 | likely_pathogenic | 0.9711 | pathogenic | -1.445 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
A/I | 0.7925 | likely_pathogenic | 0.8315 | pathogenic | -0.101 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
A/K | 0.9865 | likely_pathogenic | 0.9867 | pathogenic | -1.318 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
A/L | 0.7644 | likely_pathogenic | 0.7725 | pathogenic | -0.101 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
A/M | 0.7889 | likely_pathogenic | 0.8078 | pathogenic | -0.161 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
A/N | 0.9362 | likely_pathogenic | 0.946 | pathogenic | -1.203 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
A/P | 0.9648 | likely_pathogenic | 0.9723 | pathogenic | -0.3 | Destabilizing | 1.0 | D | 0.796 | deleterious | D | 0.525536139 | None | None | N |
A/Q | 0.9531 | likely_pathogenic | 0.9495 | pathogenic | -1.247 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
A/R | 0.9713 | likely_pathogenic | 0.9703 | pathogenic | -1.075 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
A/S | 0.2489 | likely_benign | 0.287 | benign | -1.542 | Destabilizing | 1.0 | D | 0.593 | neutral | N | 0.500061691 | None | None | N |
A/T | 0.4656 | ambiguous | 0.5156 | ambiguous | -1.404 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | N | 0.492346285 | None | None | N |
A/V | 0.4747 | ambiguous | 0.5246 | ambiguous | -0.3 | Destabilizing | 1.0 | D | 0.635 | neutral | N | 0.459751077 | None | None | N |
A/W | 0.9833 | likely_pathogenic | 0.9851 | pathogenic | -1.315 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
A/Y | 0.9292 | likely_pathogenic | 0.9408 | pathogenic | -0.833 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.