Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32759 | 98500;98501;98502 | chr2:178539790;178539789;178539788 | chr2:179404517;179404516;179404515 |
N2AB | 31118 | 93577;93578;93579 | chr2:178539790;178539789;178539788 | chr2:179404517;179404516;179404515 |
N2A | 30191 | 90796;90797;90798 | chr2:178539790;178539789;178539788 | chr2:179404517;179404516;179404515 |
N2B | 23694 | 71305;71306;71307 | chr2:178539790;178539789;178539788 | chr2:179404517;179404516;179404515 |
Novex-1 | 23819 | 71680;71681;71682 | chr2:178539790;178539789;178539788 | chr2:179404517;179404516;179404515 |
Novex-2 | 23886 | 71881;71882;71883 | chr2:178539790;178539789;178539788 | chr2:179404517;179404516;179404515 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs748573833 | -0.761 | 0.999 | N | 0.581 | 0.374 | 0.362960570912 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.11408E-04 | None | 0 | None | 0 | 0 | 0 |
E/K | rs748573833 | -0.761 | 0.999 | N | 0.581 | 0.374 | 0.362960570912 | gnomAD-4.0.0 | 3.18233E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.54539E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6374 | likely_pathogenic | 0.616 | pathogenic | -0.569 | Destabilizing | 0.999 | D | 0.647 | neutral | N | 0.508315815 | None | None | I |
E/C | 0.9729 | likely_pathogenic | 0.9706 | pathogenic | -0.531 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
E/D | 0.6808 | likely_pathogenic | 0.6794 | pathogenic | -1.433 | Destabilizing | 0.999 | D | 0.524 | neutral | N | 0.50883589 | None | None | I |
E/F | 0.9803 | likely_pathogenic | 0.9804 | pathogenic | -0.498 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
E/G | 0.8061 | likely_pathogenic | 0.7913 | pathogenic | -0.945 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | N | 0.500120406 | None | None | I |
E/H | 0.9117 | likely_pathogenic | 0.906 | pathogenic | -1.055 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
E/I | 0.8638 | likely_pathogenic | 0.8497 | pathogenic | 0.454 | Stabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | I |
E/K | 0.8037 | likely_pathogenic | 0.7624 | pathogenic | -1.05 | Destabilizing | 0.999 | D | 0.581 | neutral | N | 0.471797655 | None | None | I |
E/L | 0.9232 | likely_pathogenic | 0.9145 | pathogenic | 0.454 | Stabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
E/M | 0.8718 | likely_pathogenic | 0.8596 | pathogenic | 0.952 | Stabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
E/N | 0.8726 | likely_pathogenic | 0.8635 | pathogenic | -1.323 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | I |
E/P | 0.9985 | likely_pathogenic | 0.9981 | pathogenic | 0.136 | Stabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
E/Q | 0.4416 | ambiguous | 0.4163 | ambiguous | -1.109 | Destabilizing | 1.0 | D | 0.647 | neutral | N | 0.473837882 | None | None | I |
E/R | 0.8747 | likely_pathogenic | 0.8557 | pathogenic | -1.02 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | I |
E/S | 0.6524 | likely_pathogenic | 0.6461 | pathogenic | -1.714 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | I |
E/T | 0.7083 | likely_pathogenic | 0.7029 | pathogenic | -1.401 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
E/V | 0.6871 | likely_pathogenic | 0.6624 | pathogenic | 0.136 | Stabilizing | 1.0 | D | 0.793 | deleterious | N | 0.423179775 | None | None | I |
E/W | 0.9953 | likely_pathogenic | 0.9952 | pathogenic | -0.616 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
E/Y | 0.9693 | likely_pathogenic | 0.9666 | pathogenic | -0.363 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.