Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3276 | 10051;10052;10053 | chr2:178764689;178764688;178764687 | chr2:179629416;179629415;179629414 |
N2AB | 3276 | 10051;10052;10053 | chr2:178764689;178764688;178764687 | chr2:179629416;179629415;179629414 |
N2A | 3276 | 10051;10052;10053 | chr2:178764689;178764688;178764687 | chr2:179629416;179629415;179629414 |
N2B | 3230 | 9913;9914;9915 | chr2:178764689;178764688;178764687 | chr2:179629416;179629415;179629414 |
Novex-1 | 3230 | 9913;9914;9915 | chr2:178764689;178764688;178764687 | chr2:179629416;179629415;179629414 |
Novex-2 | 3230 | 9913;9914;9915 | chr2:178764689;178764688;178764687 | chr2:179629416;179629415;179629414 |
Novex-3 | 3276 | 10051;10052;10053 | chr2:178764689;178764688;178764687 | chr2:179629416;179629415;179629414 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs377049518 | -0.039 | 0.193 | N | 0.391 | 0.203 | None | gnomAD-2.1.1 | 1.77E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.88E-05 | 0 |
E/G | rs377049518 | -0.039 | 0.193 | N | 0.391 | 0.203 | None | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 5.88E-05 | 0 | 0 |
E/G | rs377049518 | -0.039 | 0.193 | N | 0.391 | 0.203 | None | gnomAD-4.0.0 | 8.85982E-05 | None | None | None | None | N | None | 2.6693E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.16948E-04 | 0 | 4.80092E-05 |
E/K | rs929694215 | None | 0.193 | N | 0.335 | 0.354 | 0.276065633971 | gnomAD-4.0.0 | 3.18103E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85654E-06 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1951 | likely_benign | 0.2572 | benign | -0.319 | Destabilizing | 0.09 | N | 0.36 | neutral | N | 0.48973954 | None | None | N |
E/C | 0.909 | likely_pathogenic | 0.9595 | pathogenic | -0.312 | Destabilizing | 0.981 | D | 0.441 | neutral | None | None | None | None | N |
E/D | 0.1025 | likely_benign | 0.1344 | benign | -0.32 | Destabilizing | 0.001 | N | 0.153 | neutral | N | 0.426654932 | None | None | N |
E/F | 0.8781 | likely_pathogenic | 0.9458 | pathogenic | -0.099 | Destabilizing | 0.932 | D | 0.429 | neutral | None | None | None | None | N |
E/G | 0.0904 | likely_benign | 0.1149 | benign | -0.499 | Destabilizing | 0.193 | N | 0.391 | neutral | N | 0.405104235 | None | None | N |
E/H | 0.5476 | ambiguous | 0.7029 | pathogenic | 0.399 | Stabilizing | 0.818 | D | 0.34 | neutral | None | None | None | None | N |
E/I | 0.7179 | likely_pathogenic | 0.8458 | pathogenic | 0.121 | Stabilizing | 0.818 | D | 0.453 | neutral | None | None | None | None | N |
E/K | 0.1666 | likely_benign | 0.2423 | benign | 0.257 | Stabilizing | 0.193 | N | 0.335 | neutral | N | 0.473220113 | None | None | N |
E/L | 0.6143 | likely_pathogenic | 0.7534 | pathogenic | 0.121 | Stabilizing | 0.388 | N | 0.483 | neutral | None | None | None | None | N |
E/M | 0.6208 | likely_pathogenic | 0.7571 | pathogenic | -0.011 | Destabilizing | 0.981 | D | 0.41 | neutral | None | None | None | None | N |
E/N | 0.1804 | likely_benign | 0.252 | benign | -0.163 | Destabilizing | 0.241 | N | 0.346 | neutral | None | None | None | None | N |
E/P | 0.8296 | likely_pathogenic | 0.9167 | pathogenic | -0.006 | Destabilizing | 0.818 | D | 0.415 | neutral | None | None | None | None | N |
E/Q | 0.1456 | likely_benign | 0.19 | benign | -0.106 | Destabilizing | 0.018 | N | 0.21 | neutral | N | 0.500555206 | None | None | N |
E/R | 0.3012 | likely_benign | 0.4346 | ambiguous | 0.59 | Stabilizing | 0.388 | N | 0.371 | neutral | None | None | None | None | N |
E/S | 0.1827 | likely_benign | 0.2375 | benign | -0.306 | Destabilizing | 0.004 | N | 0.135 | neutral | None | None | None | None | N |
E/T | 0.3093 | likely_benign | 0.4116 | ambiguous | -0.147 | Destabilizing | 0.241 | N | 0.417 | neutral | None | None | None | None | N |
E/V | 0.5079 | ambiguous | 0.6566 | pathogenic | -0.006 | Destabilizing | 0.324 | N | 0.475 | neutral | D | 0.595341902 | None | None | N |
E/W | 0.9382 | likely_pathogenic | 0.9768 | pathogenic | 0.066 | Stabilizing | 0.981 | D | 0.521 | neutral | None | None | None | None | N |
E/Y | 0.7277 | likely_pathogenic | 0.8631 | pathogenic | 0.144 | Stabilizing | 0.932 | D | 0.411 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.