Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32763 | 98512;98513;98514 | chr2:178539778;178539777;178539776 | chr2:179404505;179404504;179404503 |
N2AB | 31122 | 93589;93590;93591 | chr2:178539778;178539777;178539776 | chr2:179404505;179404504;179404503 |
N2A | 30195 | 90808;90809;90810 | chr2:178539778;178539777;178539776 | chr2:179404505;179404504;179404503 |
N2B | 23698 | 71317;71318;71319 | chr2:178539778;178539777;178539776 | chr2:179404505;179404504;179404503 |
Novex-1 | 23823 | 71692;71693;71694 | chr2:178539778;178539777;178539776 | chr2:179404505;179404504;179404503 |
Novex-2 | 23890 | 71893;71894;71895 | chr2:178539778;178539777;178539776 | chr2:179404505;179404504;179404503 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs879242471 | 0.045 | 0.1 | N | 0.421 | 0.139 | None | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 1.29199E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/R | rs879242471 | 0.045 | 0.1 | N | 0.421 | 0.139 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs879242471 | 0.045 | 0.1 | N | 0.421 | 0.139 | None | gnomAD-4.0.0 | 4.33772E-06 | None | None | None | None | N | None | 9.34205E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8058 | likely_pathogenic | 0.8116 | pathogenic | 0.023 | Stabilizing | 0.953 | D | 0.557 | neutral | None | None | None | None | N |
K/C | 0.921 | likely_pathogenic | 0.923 | pathogenic | -0.365 | Destabilizing | 0.999 | D | 0.658 | neutral | None | None | None | None | N |
K/D | 0.9292 | likely_pathogenic | 0.9365 | pathogenic | -0.129 | Destabilizing | 0.993 | D | 0.524 | neutral | None | None | None | None | N |
K/E | 0.5829 | likely_pathogenic | 0.5939 | pathogenic | -0.098 | Destabilizing | 0.939 | D | 0.559 | neutral | N | 0.488036544 | None | None | N |
K/F | 0.9686 | likely_pathogenic | 0.966 | pathogenic | -0.092 | Destabilizing | 0.998 | D | 0.649 | neutral | None | None | None | None | N |
K/G | 0.8428 | likely_pathogenic | 0.8494 | pathogenic | -0.192 | Destabilizing | 0.976 | D | 0.525 | neutral | None | None | None | None | N |
K/H | 0.674 | likely_pathogenic | 0.6686 | pathogenic | -0.333 | Destabilizing | 0.998 | D | 0.56 | neutral | None | None | None | None | N |
K/I | 0.8395 | likely_pathogenic | 0.8416 | pathogenic | 0.52 | Stabilizing | 0.982 | D | 0.659 | neutral | D | 0.534118337 | None | None | N |
K/L | 0.7403 | likely_pathogenic | 0.7427 | pathogenic | 0.52 | Stabilizing | 0.953 | D | 0.533 | neutral | None | None | None | None | N |
K/M | 0.6586 | likely_pathogenic | 0.6601 | pathogenic | 0.063 | Stabilizing | 0.999 | D | 0.564 | neutral | None | None | None | None | N |
K/N | 0.8765 | likely_pathogenic | 0.8834 | pathogenic | None | Stabilizing | 0.982 | D | 0.5 | neutral | N | 0.508566531 | None | None | N |
K/P | 0.8602 | likely_pathogenic | 0.8632 | pathogenic | 0.382 | Stabilizing | 0.998 | D | 0.566 | neutral | None | None | None | None | N |
K/Q | 0.3603 | ambiguous | 0.3632 | ambiguous | -0.096 | Destabilizing | 0.982 | D | 0.537 | neutral | N | 0.517954019 | None | None | N |
K/R | 0.1084 | likely_benign | 0.1095 | benign | -0.098 | Destabilizing | 0.1 | N | 0.421 | neutral | N | 0.432625978 | None | None | N |
K/S | 0.8541 | likely_pathogenic | 0.8597 | pathogenic | -0.409 | Destabilizing | 0.91 | D | 0.552 | neutral | None | None | None | None | N |
K/T | 0.5955 | likely_pathogenic | 0.6131 | pathogenic | -0.227 | Destabilizing | 0.322 | N | 0.424 | neutral | N | 0.503275355 | None | None | N |
K/V | 0.7933 | likely_pathogenic | 0.8038 | pathogenic | 0.382 | Stabilizing | 0.986 | D | 0.5 | neutral | None | None | None | None | N |
K/W | 0.9329 | likely_pathogenic | 0.9289 | pathogenic | -0.153 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
K/Y | 0.9151 | likely_pathogenic | 0.9116 | pathogenic | 0.188 | Stabilizing | 0.998 | D | 0.629 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.