Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32776 | 98551;98552;98553 | chr2:178539739;178539738;178539737 | chr2:179404466;179404465;179404464 |
N2AB | 31135 | 93628;93629;93630 | chr2:178539739;178539738;178539737 | chr2:179404466;179404465;179404464 |
N2A | 30208 | 90847;90848;90849 | chr2:178539739;178539738;178539737 | chr2:179404466;179404465;179404464 |
N2B | 23711 | 71356;71357;71358 | chr2:178539739;178539738;178539737 | chr2:179404466;179404465;179404464 |
Novex-1 | 23836 | 71731;71732;71733 | chr2:178539739;178539738;178539737 | chr2:179404466;179404465;179404464 |
Novex-2 | 23903 | 71932;71933;71934 | chr2:178539739;178539738;178539737 | chr2:179404466;179404465;179404464 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.009 | N | 0.527 | 0.184 | 0.42538462244 | gnomAD-4.0.0 | 1.08029E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.18125E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1483 | likely_benign | 0.1759 | benign | -1.894 | Destabilizing | None | N | 0.311 | neutral | N | 0.50183256 | None | None | N |
V/C | 0.5952 | likely_pathogenic | 0.6378 | pathogenic | -1.192 | Destabilizing | 0.824 | D | 0.604 | neutral | None | None | None | None | N |
V/D | 0.382 | ambiguous | 0.4483 | ambiguous | -2.238 | Highly Destabilizing | 0.001 | N | 0.569 | neutral | D | 0.53180875 | None | None | N |
V/E | 0.2507 | likely_benign | 0.2825 | benign | -2.172 | Highly Destabilizing | 0.081 | N | 0.651 | neutral | None | None | None | None | N |
V/F | 0.1335 | likely_benign | 0.1513 | benign | -1.303 | Destabilizing | 0.317 | N | 0.665 | neutral | N | 0.52172783 | None | None | N |
V/G | 0.2581 | likely_benign | 0.3058 | benign | -2.286 | Highly Destabilizing | 0.062 | N | 0.675 | prob.neutral | N | 0.492506866 | None | None | N |
V/H | 0.4171 | ambiguous | 0.4531 | ambiguous | -1.979 | Destabilizing | 0.935 | D | 0.667 | neutral | None | None | None | None | N |
V/I | 0.076 | likely_benign | 0.0771 | benign | -0.866 | Destabilizing | 0.027 | N | 0.538 | neutral | N | 0.469856215 | None | None | N |
V/K | 0.3744 | ambiguous | 0.4149 | ambiguous | -1.701 | Destabilizing | 0.149 | N | 0.664 | neutral | None | None | None | None | N |
V/L | 0.1249 | likely_benign | 0.1308 | benign | -0.866 | Destabilizing | 0.009 | N | 0.527 | neutral | N | 0.454406759 | None | None | N |
V/M | 0.1211 | likely_benign | 0.1253 | benign | -0.608 | Destabilizing | 0.016 | N | 0.42 | neutral | None | None | None | None | N |
V/N | 0.2583 | likely_benign | 0.2907 | benign | -1.579 | Destabilizing | 0.235 | N | 0.69 | prob.neutral | None | None | None | None | N |
V/P | 0.9163 | likely_pathogenic | 0.9436 | pathogenic | -1.178 | Destabilizing | 0.38 | N | 0.663 | neutral | None | None | None | None | N |
V/Q | 0.2448 | likely_benign | 0.2652 | benign | -1.667 | Destabilizing | 0.555 | D | 0.676 | prob.neutral | None | None | None | None | N |
V/R | 0.3209 | likely_benign | 0.3661 | ambiguous | -1.226 | Destabilizing | 0.38 | N | 0.703 | prob.neutral | None | None | None | None | N |
V/S | 0.167 | likely_benign | 0.1921 | benign | -2.081 | Highly Destabilizing | 0.081 | N | 0.637 | neutral | None | None | None | None | N |
V/T | 0.1479 | likely_benign | 0.1623 | benign | -1.912 | Destabilizing | 0.002 | N | 0.431 | neutral | None | None | None | None | N |
V/W | 0.7124 | likely_pathogenic | 0.7573 | pathogenic | -1.674 | Destabilizing | 0.935 | D | 0.697 | prob.neutral | None | None | None | None | N |
V/Y | 0.4175 | ambiguous | 0.4493 | ambiguous | -1.384 | Destabilizing | 0.555 | D | 0.653 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.