Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32822 | 98689;98690;98691 | chr2:178539601;178539600;178539599 | chr2:179404328;179404327;179404326 |
N2AB | 31181 | 93766;93767;93768 | chr2:178539601;178539600;178539599 | chr2:179404328;179404327;179404326 |
N2A | 30254 | 90985;90986;90987 | chr2:178539601;178539600;178539599 | chr2:179404328;179404327;179404326 |
N2B | 23757 | 71494;71495;71496 | chr2:178539601;178539600;178539599 | chr2:179404328;179404327;179404326 |
Novex-1 | 23882 | 71869;71870;71871 | chr2:178539601;178539600;178539599 | chr2:179404328;179404327;179404326 |
Novex-2 | 23949 | 72070;72071;72072 | chr2:178539601;178539600;178539599 | chr2:179404328;179404327;179404326 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | rs191054704 | 0.131 | 1.0 | N | 0.689 | 0.463 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92604E-04 | None | 0 | 0 | 0 | 0 | 0 |
D/A | rs191054704 | 0.131 | 1.0 | N | 0.689 | 0.463 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 1E-03 | 0 | None | None | None | 0 | None |
D/A | rs191054704 | 0.131 | 1.0 | N | 0.689 | 0.463 | None | gnomAD-4.0.0 | 6.56711E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.9305E-04 | None | 0 | 0 | 0 | 0 | 0 |
D/G | rs191054704 | -0.106 | 1.0 | N | 0.646 | 0.513 | 0.32580497728 | gnomAD-2.1.1 | 5.72E-05 | None | None | None | None | N | None | 0 | 2.83E-05 | None | 0 | 7.68285E-04 | None | 0 | None | 0 | 0 | 0 |
D/G | rs191054704 | -0.106 | 1.0 | N | 0.646 | 0.513 | 0.32580497728 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 5.77812E-04 | None | 0 | 0 | 0 | 0 | 0 |
D/G | rs191054704 | -0.106 | 1.0 | N | 0.646 | 0.513 | 0.32580497728 | gnomAD-4.0.0 | 2.60262E-05 | None | None | None | None | N | None | 0 | 1.66667E-05 | None | 0 | 6.45995E-04 | None | 0 | 0 | 0 | 0 | 1.92135E-04 |
D/N | rs921446344 | 0.655 | 1.0 | N | 0.626 | 0.364 | 0.288352970974 | gnomAD-2.1.1 | 7.14E-06 | None | None | None | None | N | None | 4.13E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 7.82E-06 | 0 |
D/N | rs921446344 | 0.655 | 1.0 | N | 0.626 | 0.364 | 0.288352970974 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
D/N | rs921446344 | 0.655 | 1.0 | N | 0.626 | 0.364 | 0.288352970974 | gnomAD-4.0.0 | 5.57708E-06 | None | None | None | None | N | None | 1.33515E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 6.78075E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5267 | ambiguous | 0.486 | ambiguous | -0.215 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | N | 0.474415026 | None | None | N |
D/C | 0.8651 | likely_pathogenic | 0.8243 | pathogenic | 0.263 | Stabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | N |
D/E | 0.3426 | ambiguous | 0.2998 | benign | -0.376 | Destabilizing | 1.0 | D | 0.385 | neutral | N | 0.503556917 | None | None | N |
D/F | 0.8529 | likely_pathogenic | 0.8134 | pathogenic | -0.427 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
D/G | 0.5965 | likely_pathogenic | 0.5665 | pathogenic | -0.395 | Destabilizing | 1.0 | D | 0.646 | neutral | N | 0.485379711 | None | None | N |
D/H | 0.6942 | likely_pathogenic | 0.6306 | pathogenic | -0.437 | Destabilizing | 1.0 | D | 0.6 | neutral | N | 0.468667808 | None | None | N |
D/I | 0.6884 | likely_pathogenic | 0.6509 | pathogenic | 0.202 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
D/K | 0.7832 | likely_pathogenic | 0.7455 | pathogenic | 0.343 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
D/L | 0.7131 | likely_pathogenic | 0.68 | pathogenic | 0.202 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
D/M | 0.8537 | likely_pathogenic | 0.832 | pathogenic | 0.487 | Stabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
D/N | 0.1801 | likely_benign | 0.1665 | benign | 0.191 | Stabilizing | 1.0 | D | 0.626 | neutral | N | 0.488472821 | None | None | N |
D/P | 0.9796 | likely_pathogenic | 0.976 | pathogenic | 0.085 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
D/Q | 0.6942 | likely_pathogenic | 0.6502 | pathogenic | 0.195 | Stabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
D/R | 0.8007 | likely_pathogenic | 0.7667 | pathogenic | 0.363 | Stabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | N |
D/S | 0.3231 | likely_benign | 0.3003 | benign | 0.084 | Stabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | N |
D/T | 0.5177 | ambiguous | 0.5268 | ambiguous | 0.215 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
D/V | 0.4765 | ambiguous | 0.4424 | ambiguous | 0.085 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.478440724 | None | None | N |
D/W | 0.9703 | likely_pathogenic | 0.9614 | pathogenic | -0.389 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
D/Y | 0.5645 | likely_pathogenic | 0.4816 | ambiguous | -0.212 | Destabilizing | 1.0 | D | 0.633 | neutral | N | 0.451373247 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.