Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3282298689;98690;98691 chr2:178539601;178539600;178539599chr2:179404328;179404327;179404326
N2AB3118193766;93767;93768 chr2:178539601;178539600;178539599chr2:179404328;179404327;179404326
N2A3025490985;90986;90987 chr2:178539601;178539600;178539599chr2:179404328;179404327;179404326
N2B2375771494;71495;71496 chr2:178539601;178539600;178539599chr2:179404328;179404327;179404326
Novex-12388271869;71870;71871 chr2:178539601;178539600;178539599chr2:179404328;179404327;179404326
Novex-22394972070;72071;72072 chr2:178539601;178539600;178539599chr2:179404328;179404327;179404326
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: D
  • RefSeq wild type transcript codon: GAT
  • RefSeq wild type template codon: CTA
  • Domain: Fn3-127
  • Domain position: 28
  • Structural Position: 29
  • Q(SASA): 0.6664
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
D/A rs191054704 0.131 1.0 N 0.689 0.463 None gnomAD-3.1.2 6.57E-06 None None None None N None 0 0 0 0 1.92604E-04 None 0 0 0 0 0
D/A rs191054704 0.131 1.0 N 0.689 0.463 None 1000 genomes 1.99681E-04 None None None None N None 0 0 None None 1E-03 0 None None None 0 None
D/A rs191054704 0.131 1.0 N 0.689 0.463 None gnomAD-4.0.0 6.56711E-06 None None None None N None 0 0 None 0 1.9305E-04 None 0 0 0 0 0
D/G rs191054704 -0.106 1.0 N 0.646 0.513 0.32580497728 gnomAD-2.1.1 5.72E-05 None None None None N None 0 2.83E-05 None 0 7.68285E-04 None 0 None 0 0 0
D/G rs191054704 -0.106 1.0 N 0.646 0.513 0.32580497728 gnomAD-3.1.2 1.97E-05 None None None None N None 0 0 0 0 5.77812E-04 None 0 0 0 0 0
D/G rs191054704 -0.106 1.0 N 0.646 0.513 0.32580497728 gnomAD-4.0.0 2.60262E-05 None None None None N None 0 1.66667E-05 None 0 6.45995E-04 None 0 0 0 0 1.92135E-04
D/N rs921446344 0.655 1.0 N 0.626 0.364 0.288352970974 gnomAD-2.1.1 7.14E-06 None None None None N None 4.13E-05 0 None 0 0 None 0 None 0 7.82E-06 0
D/N rs921446344 0.655 1.0 N 0.626 0.364 0.288352970974 gnomAD-3.1.2 1.97E-05 None None None None N None 2.41E-05 0 0 0 0 None 0 0 2.94E-05 0 0
D/N rs921446344 0.655 1.0 N 0.626 0.364 0.288352970974 gnomAD-4.0.0 5.57708E-06 None None None None N None 1.33515E-05 0 None 0 0 None 0 0 6.78075E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
D/A 0.5267 ambiguous 0.486 ambiguous -0.215 Destabilizing 1.0 D 0.689 prob.neutral N 0.474415026 None None N
D/C 0.8651 likely_pathogenic 0.8243 pathogenic 0.263 Stabilizing 1.0 D 0.675 neutral None None None None N
D/E 0.3426 ambiguous 0.2998 benign -0.376 Destabilizing 1.0 D 0.385 neutral N 0.503556917 None None N
D/F 0.8529 likely_pathogenic 0.8134 pathogenic -0.427 Destabilizing 1.0 D 0.649 neutral None None None None N
D/G 0.5965 likely_pathogenic 0.5665 pathogenic -0.395 Destabilizing 1.0 D 0.646 neutral N 0.485379711 None None N
D/H 0.6942 likely_pathogenic 0.6306 pathogenic -0.437 Destabilizing 1.0 D 0.6 neutral N 0.468667808 None None N
D/I 0.6884 likely_pathogenic 0.6509 pathogenic 0.202 Stabilizing 1.0 D 0.679 prob.neutral None None None None N
D/K 0.7832 likely_pathogenic 0.7455 pathogenic 0.343 Stabilizing 1.0 D 0.717 prob.delet. None None None None N
D/L 0.7131 likely_pathogenic 0.68 pathogenic 0.202 Stabilizing 1.0 D 0.715 prob.delet. None None None None N
D/M 0.8537 likely_pathogenic 0.832 pathogenic 0.487 Stabilizing 1.0 D 0.67 neutral None None None None N
D/N 0.1801 likely_benign 0.1665 benign 0.191 Stabilizing 1.0 D 0.626 neutral N 0.488472821 None None N
D/P 0.9796 likely_pathogenic 0.976 pathogenic 0.085 Stabilizing 1.0 D 0.693 prob.neutral None None None None N
D/Q 0.6942 likely_pathogenic 0.6502 pathogenic 0.195 Stabilizing 1.0 D 0.692 prob.neutral None None None None N
D/R 0.8007 likely_pathogenic 0.7667 pathogenic 0.363 Stabilizing 1.0 D 0.682 prob.neutral None None None None N
D/S 0.3231 likely_benign 0.3003 benign 0.084 Stabilizing 1.0 D 0.645 neutral None None None None N
D/T 0.5177 ambiguous 0.5268 ambiguous 0.215 Stabilizing 1.0 D 0.723 prob.delet. None None None None N
D/V 0.4765 ambiguous 0.4424 ambiguous 0.085 Stabilizing 1.0 D 0.717 prob.delet. N 0.478440724 None None N
D/W 0.9703 likely_pathogenic 0.9614 pathogenic -0.389 Destabilizing 1.0 D 0.685 prob.neutral None None None None N
D/Y 0.5645 likely_pathogenic 0.4816 ambiguous -0.212 Destabilizing 1.0 D 0.633 neutral N 0.451373247 None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.