Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32856 | 98791;98792;98793 | chr2:178539499;178539498;178539497 | chr2:179404226;179404225;179404224 |
N2AB | 31215 | 93868;93869;93870 | chr2:178539499;178539498;178539497 | chr2:179404226;179404225;179404224 |
N2A | 30288 | 91087;91088;91089 | chr2:178539499;178539498;178539497 | chr2:179404226;179404225;179404224 |
N2B | 23791 | 71596;71597;71598 | chr2:178539499;178539498;178539497 | chr2:179404226;179404225;179404224 |
Novex-1 | 23916 | 71971;71972;71973 | chr2:178539499;178539498;178539497 | chr2:179404226;179404225;179404224 |
Novex-2 | 23983 | 72172;72173;72174 | chr2:178539499;178539498;178539497 | chr2:179404226;179404225;179404224 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs1693334476 | None | 0.997 | N | 0.491 | 0.285 | 0.475971816791 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/L | rs1693334476 | None | 0.997 | N | 0.491 | 0.285 | 0.475971816791 | gnomAD-4.0.0 | 6.57479E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46998E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3483 | ambiguous | 0.2624 | benign | -1.154 | Destabilizing | 0.999 | D | 0.553 | neutral | N | 0.495258012 | None | None | N |
V/C | 0.8999 | likely_pathogenic | 0.8553 | pathogenic | -0.928 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
V/D | 0.7189 | likely_pathogenic | 0.6246 | pathogenic | -0.663 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
V/E | 0.6018 | likely_pathogenic | 0.5166 | ambiguous | -0.704 | Destabilizing | 1.0 | D | 0.838 | deleterious | N | 0.484424943 | None | None | N |
V/F | 0.3596 | ambiguous | 0.2959 | benign | -0.922 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
V/G | 0.5618 | ambiguous | 0.4565 | ambiguous | -1.412 | Destabilizing | 1.0 | D | 0.846 | deleterious | D | 0.523330048 | None | None | N |
V/H | 0.8203 | likely_pathogenic | 0.7396 | pathogenic | -0.794 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/I | 0.0902 | likely_benign | 0.0845 | benign | -0.577 | Destabilizing | 0.998 | D | 0.459 | neutral | None | None | None | None | N |
V/K | 0.7178 | likely_pathogenic | 0.626 | pathogenic | -0.945 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
V/L | 0.2842 | likely_benign | 0.229 | benign | -0.577 | Destabilizing | 0.997 | D | 0.491 | neutral | N | 0.483232865 | None | None | N |
V/M | 0.2669 | likely_benign | 0.2142 | benign | -0.516 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | N | 0.505667007 | None | None | N |
V/N | 0.5646 | likely_pathogenic | 0.4392 | ambiguous | -0.736 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
V/P | 0.7129 | likely_pathogenic | 0.6134 | pathogenic | -0.733 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
V/Q | 0.6133 | likely_pathogenic | 0.512 | ambiguous | -0.938 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
V/R | 0.6462 | likely_pathogenic | 0.5478 | ambiguous | -0.384 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
V/S | 0.4589 | ambiguous | 0.3471 | ambiguous | -1.265 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
V/T | 0.251 | likely_benign | 0.1946 | benign | -1.196 | Destabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | N |
V/W | 0.9209 | likely_pathogenic | 0.888 | pathogenic | -1.01 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
V/Y | 0.787 | likely_pathogenic | 0.709 | pathogenic | -0.739 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.