Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32858 | 98797;98798;98799 | chr2:178539493;178539492;178539491 | chr2:179404220;179404219;179404218 |
N2AB | 31217 | 93874;93875;93876 | chr2:178539493;178539492;178539491 | chr2:179404220;179404219;179404218 |
N2A | 30290 | 91093;91094;91095 | chr2:178539493;178539492;178539491 | chr2:179404220;179404219;179404218 |
N2B | 23793 | 71602;71603;71604 | chr2:178539493;178539492;178539491 | chr2:179404220;179404219;179404218 |
Novex-1 | 23918 | 71977;71978;71979 | chr2:178539493;178539492;178539491 | chr2:179404220;179404219;179404218 |
Novex-2 | 23985 | 72178;72179;72180 | chr2:178539493;178539492;178539491 | chr2:179404220;179404219;179404218 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs1322355821 | None | 0.978 | N | 0.714 | 0.378 | 0.34854441366 | gnomAD-4.0.0 | 3.18228E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.54539E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7178 | likely_pathogenic | 0.6155 | pathogenic | -0.02 | Destabilizing | 0.944 | D | 0.598 | neutral | None | None | None | None | N |
K/C | 0.9099 | likely_pathogenic | 0.8571 | pathogenic | -0.382 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
K/D | 0.8391 | likely_pathogenic | 0.793 | pathogenic | 0.262 | Stabilizing | 0.992 | D | 0.749 | deleterious | None | None | None | None | N |
K/E | 0.4814 | ambiguous | 0.3979 | ambiguous | 0.284 | Stabilizing | 0.928 | D | 0.554 | neutral | N | 0.465761825 | None | None | N |
K/F | 0.9527 | likely_pathogenic | 0.9215 | pathogenic | -0.203 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/G | 0.7635 | likely_pathogenic | 0.6763 | pathogenic | -0.22 | Destabilizing | 0.983 | D | 0.613 | neutral | None | None | None | None | N |
K/H | 0.5526 | ambiguous | 0.4624 | ambiguous | -0.372 | Destabilizing | 0.998 | D | 0.735 | prob.delet. | None | None | None | None | N |
K/I | 0.8118 | likely_pathogenic | 0.7304 | pathogenic | 0.427 | Stabilizing | 0.989 | D | 0.733 | prob.delet. | N | 0.503648209 | None | None | N |
K/L | 0.726 | likely_pathogenic | 0.6306 | pathogenic | 0.427 | Stabilizing | 0.983 | D | 0.613 | neutral | None | None | None | None | N |
K/M | 0.627 | likely_pathogenic | 0.5259 | ambiguous | 0.105 | Stabilizing | 0.999 | D | 0.738 | prob.delet. | None | None | None | None | N |
K/N | 0.7248 | likely_pathogenic | 0.6439 | pathogenic | 0.109 | Stabilizing | 0.978 | D | 0.691 | prob.neutral | N | 0.490332195 | None | None | N |
K/P | 0.7973 | likely_pathogenic | 0.7116 | pathogenic | 0.306 | Stabilizing | 0.997 | D | 0.757 | deleterious | None | None | None | None | N |
K/Q | 0.303 | likely_benign | 0.2362 | benign | -0.01 | Destabilizing | 0.978 | D | 0.686 | prob.neutral | N | 0.474613381 | None | None | N |
K/R | 0.1045 | likely_benign | 0.088 | benign | -0.013 | Destabilizing | 0.085 | N | 0.295 | neutral | N | 0.47030364 | None | None | N |
K/S | 0.7089 | likely_pathogenic | 0.63 | pathogenic | -0.421 | Destabilizing | 0.944 | D | 0.613 | neutral | None | None | None | None | N |
K/T | 0.4242 | ambiguous | 0.3475 | ambiguous | -0.243 | Destabilizing | 0.978 | D | 0.714 | prob.delet. | N | 0.417506518 | None | None | N |
K/V | 0.7578 | likely_pathogenic | 0.6743 | pathogenic | 0.306 | Stabilizing | 0.992 | D | 0.709 | prob.delet. | None | None | None | None | N |
K/W | 0.92 | likely_pathogenic | 0.8663 | pathogenic | -0.222 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
K/Y | 0.8734 | likely_pathogenic | 0.8129 | pathogenic | 0.137 | Stabilizing | 0.997 | D | 0.727 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.