Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32867 | 98824;98825;98826 | chr2:178539466;178539465;178539464 | chr2:179404193;179404192;179404191 |
N2AB | 31226 | 93901;93902;93903 | chr2:178539466;178539465;178539464 | chr2:179404193;179404192;179404191 |
N2A | 30299 | 91120;91121;91122 | chr2:178539466;178539465;178539464 | chr2:179404193;179404192;179404191 |
N2B | 23802 | 71629;71630;71631 | chr2:178539466;178539465;178539464 | chr2:179404193;179404192;179404191 |
Novex-1 | 23927 | 72004;72005;72006 | chr2:178539466;178539465;178539464 | chr2:179404193;179404192;179404191 |
Novex-2 | 23994 | 72205;72206;72207 | chr2:178539466;178539465;178539464 | chr2:179404193;179404192;179404191 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/L | None | None | 1.0 | N | 0.712 | 0.52 | 0.758974145601 | gnomAD-4.0.0 | 4.77351E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71634E-06 | 0 | 3.02407E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.661 | likely_pathogenic | 0.5648 | pathogenic | -2.091 | Highly Destabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | N |
H/C | 0.2855 | likely_benign | 0.2237 | benign | -1.125 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
H/D | 0.6667 | likely_pathogenic | 0.5391 | ambiguous | -1.957 | Destabilizing | 1.0 | D | 0.663 | neutral | N | 0.495911373 | None | None | N |
H/E | 0.6641 | likely_pathogenic | 0.5899 | pathogenic | -1.742 | Destabilizing | 0.999 | D | 0.563 | neutral | None | None | None | None | N |
H/F | 0.302 | likely_benign | 0.2855 | benign | -0.031 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
H/G | 0.7769 | likely_pathogenic | 0.6714 | pathogenic | -2.502 | Highly Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
H/I | 0.4613 | ambiguous | 0.3859 | ambiguous | -0.845 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
H/K | 0.6915 | likely_pathogenic | 0.6264 | pathogenic | -1.222 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
H/L | 0.1886 | likely_benign | 0.1568 | benign | -0.845 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | N | 0.441231526 | None | None | N |
H/M | 0.6498 | likely_pathogenic | 0.5977 | pathogenic | -1.021 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
H/N | 0.2956 | likely_benign | 0.2296 | benign | -1.989 | Destabilizing | 0.999 | D | 0.571 | neutral | N | 0.448829502 | None | None | N |
H/P | 0.9238 | likely_pathogenic | 0.8683 | pathogenic | -1.255 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | N | 0.474736146 | None | None | N |
H/Q | 0.4644 | ambiguous | 0.3937 | ambiguous | -1.558 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | N | 0.375102535 | None | None | N |
H/R | 0.3638 | ambiguous | 0.2967 | benign | -1.348 | Destabilizing | 1.0 | D | 0.674 | neutral | N | 0.429321022 | None | None | N |
H/S | 0.4965 | ambiguous | 0.4016 | ambiguous | -2.168 | Highly Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
H/T | 0.587 | likely_pathogenic | 0.4971 | ambiguous | -1.837 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
H/V | 0.4376 | ambiguous | 0.3675 | ambiguous | -1.255 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
H/W | 0.4872 | ambiguous | 0.4428 | ambiguous | 0.607 | Stabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
H/Y | 0.1142 | likely_benign | 0.0996 | benign | 0.298 | Stabilizing | 0.999 | D | 0.576 | neutral | N | 0.417162588 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.