Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32884 | 98875;98876;98877 | chr2:178539415;178539414;178539413 | chr2:179404142;179404141;179404140 |
N2AB | 31243 | 93952;93953;93954 | chr2:178539415;178539414;178539413 | chr2:179404142;179404141;179404140 |
N2A | 30316 | 91171;91172;91173 | chr2:178539415;178539414;178539413 | chr2:179404142;179404141;179404140 |
N2B | 23819 | 71680;71681;71682 | chr2:178539415;178539414;178539413 | chr2:179404142;179404141;179404140 |
Novex-1 | 23944 | 72055;72056;72057 | chr2:178539415;178539414;178539413 | chr2:179404142;179404141;179404140 |
Novex-2 | 24011 | 72256;72257;72258 | chr2:178539415;178539414;178539413 | chr2:179404142;179404141;179404140 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/Y | None | None | 0.999 | N | 0.879 | 0.455 | 0.659942566833 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1794 | likely_benign | 0.1589 | benign | -0.547 | Destabilizing | 0.994 | D | 0.608 | neutral | N | 0.479950204 | None | None | N |
S/C | 0.2894 | likely_benign | 0.2557 | benign | -0.294 | Destabilizing | 1.0 | D | 0.81 | deleterious | N | 0.519339945 | None | None | N |
S/D | 0.8814 | likely_pathogenic | 0.8747 | pathogenic | -0.817 | Destabilizing | 0.998 | D | 0.665 | prob.neutral | None | None | None | None | N |
S/E | 0.9471 | likely_pathogenic | 0.9429 | pathogenic | -0.681 | Destabilizing | 0.998 | D | 0.682 | prob.neutral | None | None | None | None | N |
S/F | 0.8945 | likely_pathogenic | 0.8664 | pathogenic | -0.27 | Destabilizing | 0.999 | D | 0.87 | deleterious | N | 0.497641292 | None | None | N |
S/G | 0.226 | likely_benign | 0.1967 | benign | -0.928 | Destabilizing | 0.998 | D | 0.691 | prob.delet. | None | None | None | None | N |
S/H | 0.9176 | likely_pathogenic | 0.908 | pathogenic | -1.368 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
S/I | 0.7467 | likely_pathogenic | 0.701 | pathogenic | 0.402 | Stabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | N |
S/K | 0.9889 | likely_pathogenic | 0.9871 | pathogenic | -0.594 | Destabilizing | 0.998 | D | 0.67 | prob.neutral | None | None | None | None | N |
S/L | 0.5081 | ambiguous | 0.4535 | ambiguous | 0.402 | Stabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
S/M | 0.6152 | likely_pathogenic | 0.588 | pathogenic | 0.387 | Stabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
S/N | 0.6452 | likely_pathogenic | 0.6125 | pathogenic | -0.952 | Destabilizing | 0.998 | D | 0.695 | prob.delet. | None | None | None | None | N |
S/P | 0.9254 | likely_pathogenic | 0.8948 | pathogenic | 0.122 | Stabilizing | 0.999 | D | 0.823 | deleterious | N | 0.49020727 | None | None | N |
S/Q | 0.947 | likely_pathogenic | 0.9403 | pathogenic | -0.75 | Destabilizing | 0.999 | D | 0.818 | deleterious | None | None | None | None | N |
S/R | 0.9862 | likely_pathogenic | 0.983 | pathogenic | -0.881 | Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | N |
S/T | 0.187 | likely_benign | 0.1872 | benign | -0.708 | Destabilizing | 0.997 | D | 0.651 | prob.neutral | N | 0.438180939 | None | None | N |
S/V | 0.6648 | likely_pathogenic | 0.6203 | pathogenic | 0.122 | Stabilizing | 0.999 | D | 0.838 | deleterious | None | None | None | None | N |
S/W | 0.9021 | likely_pathogenic | 0.8814 | pathogenic | -0.532 | Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
S/Y | 0.8274 | likely_pathogenic | 0.786 | pathogenic | -0.14 | Destabilizing | 0.999 | D | 0.879 | deleterious | N | 0.519846924 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.