Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3293 | 10102;10103;10104 | chr2:178764638;178764637;178764636 | chr2:179629365;179629364;179629363 |
N2AB | 3293 | 10102;10103;10104 | chr2:178764638;178764637;178764636 | chr2:179629365;179629364;179629363 |
N2A | 3293 | 10102;10103;10104 | chr2:178764638;178764637;178764636 | chr2:179629365;179629364;179629363 |
N2B | 3247 | 9964;9965;9966 | chr2:178764638;178764637;178764636 | chr2:179629365;179629364;179629363 |
Novex-1 | 3247 | 9964;9965;9966 | chr2:178764638;178764637;178764636 | chr2:179629365;179629364;179629363 |
Novex-2 | 3247 | 9964;9965;9966 | chr2:178764638;178764637;178764636 | chr2:179629365;179629364;179629363 |
Novex-3 | 3293 | 10102;10103;10104 | chr2:178764638;178764637;178764636 | chr2:179629365;179629364;179629363 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs4894043 | None | 0.989 | N | 0.485 | 0.327 | 0.330331372229 | gnomAD-4.0.0 | 6.84068E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65579E-05 |
E/Q | rs2090028411 | None | 0.889 | N | 0.31 | 0.257 | 0.291694819147 | gnomAD-4.0.0 | 2.73628E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59718E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2961 | likely_benign | 0.4624 | ambiguous | -0.925 | Destabilizing | 0.978 | D | 0.587 | neutral | N | 0.502007638 | None | None | N |
E/C | 0.9523 | likely_pathogenic | 0.975 | pathogenic | -0.403 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
E/D | 0.4342 | ambiguous | 0.555 | ambiguous | -1.116 | Destabilizing | 0.989 | D | 0.485 | neutral | N | 0.511338012 | None | None | N |
E/F | 0.9246 | likely_pathogenic | 0.9624 | pathogenic | -0.713 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
E/G | 0.4776 | ambiguous | 0.6409 | pathogenic | -1.258 | Destabilizing | 0.989 | D | 0.644 | neutral | N | 0.510603052 | None | None | N |
E/H | 0.7536 | likely_pathogenic | 0.8671 | pathogenic | -1.055 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
E/I | 0.5897 | likely_pathogenic | 0.7453 | pathogenic | -0.027 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
E/K | 0.367 | ambiguous | 0.6074 | pathogenic | -0.596 | Destabilizing | 0.978 | D | 0.526 | neutral | N | 0.505072118 | None | None | N |
E/L | 0.6831 | likely_pathogenic | 0.8311 | pathogenic | -0.027 | Destabilizing | 0.999 | D | 0.684 | prob.neutral | None | None | None | None | N |
E/M | 0.6648 | likely_pathogenic | 0.815 | pathogenic | 0.507 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/N | 0.5379 | ambiguous | 0.7047 | pathogenic | -0.95 | Destabilizing | 0.998 | D | 0.607 | neutral | None | None | None | None | N |
E/P | 0.9867 | likely_pathogenic | 0.993 | pathogenic | -0.305 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/Q | 0.2198 | likely_benign | 0.3633 | ambiguous | -0.85 | Destabilizing | 0.889 | D | 0.31 | neutral | N | 0.503721528 | None | None | N |
E/R | 0.5327 | ambiguous | 0.7299 | pathogenic | -0.464 | Destabilizing | 0.998 | D | 0.616 | neutral | None | None | None | None | N |
E/S | 0.4562 | ambiguous | 0.6246 | pathogenic | -1.264 | Destabilizing | 0.82 | D | 0.387 | neutral | None | None | None | None | N |
E/T | 0.3892 | ambiguous | 0.5719 | pathogenic | -0.987 | Destabilizing | 0.983 | D | 0.647 | neutral | None | None | None | None | N |
E/V | 0.363 | ambiguous | 0.5291 | ambiguous | -0.305 | Destabilizing | 0.998 | D | 0.652 | neutral | N | 0.498054494 | None | None | N |
E/W | 0.9819 | likely_pathogenic | 0.9917 | pathogenic | -0.551 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
E/Y | 0.8556 | likely_pathogenic | 0.9237 | pathogenic | -0.478 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.