Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32939 | 99040;99041;99042 | chr2:178539120;178539119;178539118 | chr2:179403847;179403846;179403845 |
N2AB | 31298 | 94117;94118;94119 | chr2:178539120;178539119;178539118 | chr2:179403847;179403846;179403845 |
N2A | 30371 | 91336;91337;91338 | chr2:178539120;178539119;178539118 | chr2:179403847;179403846;179403845 |
N2B | 23874 | 71845;71846;71847 | chr2:178539120;178539119;178539118 | chr2:179403847;179403846;179403845 |
Novex-1 | 23999 | 72220;72221;72222 | chr2:178539120;178539119;178539118 | chr2:179403847;179403846;179403845 |
Novex-2 | 24066 | 72421;72422;72423 | chr2:178539120;178539119;178539118 | chr2:179403847;179403846;179403845 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1559083229 | None | 0.051 | N | 0.305 | 0.184 | 0.26169431596 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
T/I | rs1559083229 | None | 0.051 | N | 0.305 | 0.184 | 0.26169431596 | gnomAD-4.0.0 | 2.73686E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69847E-06 | 1.15931E-05 | 0 |
T/R | None | None | 0.934 | N | 0.365 | 0.306 | 0.471211772063 | gnomAD-4.0.0 | 6.84215E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99489E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0806 | likely_benign | 0.0749 | benign | -0.888 | Destabilizing | 0.454 | N | 0.218 | neutral | N | 0.381337861 | None | None | N |
T/C | 0.3784 | ambiguous | 0.3022 | benign | -0.611 | Destabilizing | 0.998 | D | 0.339 | neutral | None | None | None | None | N |
T/D | 0.4576 | ambiguous | 0.4245 | ambiguous | -0.582 | Destabilizing | 0.842 | D | 0.342 | neutral | None | None | None | None | N |
T/E | 0.3841 | ambiguous | 0.3405 | ambiguous | -0.579 | Destabilizing | 0.842 | D | 0.352 | neutral | None | None | None | None | N |
T/F | 0.2809 | likely_benign | 0.2261 | benign | -0.933 | Destabilizing | 0.974 | D | 0.459 | neutral | None | None | None | None | N |
T/G | 0.2456 | likely_benign | 0.2052 | benign | -1.147 | Destabilizing | 0.728 | D | 0.428 | neutral | None | None | None | None | N |
T/H | 0.3355 | likely_benign | 0.2817 | benign | -1.391 | Destabilizing | 0.998 | D | 0.438 | neutral | None | None | None | None | N |
T/I | 0.1177 | likely_benign | 0.1006 | benign | -0.287 | Destabilizing | 0.051 | N | 0.305 | neutral | N | 0.428707733 | None | None | N |
T/K | 0.2436 | likely_benign | 0.2062 | benign | -0.834 | Destabilizing | 0.801 | D | 0.353 | neutral | N | 0.360711873 | None | None | N |
T/L | 0.087 | likely_benign | 0.0758 | benign | -0.287 | Destabilizing | 0.525 | D | 0.354 | neutral | None | None | None | None | N |
T/M | 0.0837 | likely_benign | 0.0754 | benign | 0.066 | Stabilizing | 0.974 | D | 0.349 | neutral | None | None | None | None | N |
T/N | 0.1165 | likely_benign | 0.1055 | benign | -0.815 | Destabilizing | 0.842 | D | 0.269 | neutral | None | None | None | None | N |
T/P | 0.1538 | likely_benign | 0.1642 | benign | -0.456 | Destabilizing | 0.966 | D | 0.353 | neutral | N | 0.409217896 | None | None | N |
T/Q | 0.2742 | likely_benign | 0.2334 | benign | -1.034 | Destabilizing | 0.974 | D | 0.353 | neutral | None | None | None | None | N |
T/R | 0.2279 | likely_benign | 0.2021 | benign | -0.521 | Destabilizing | 0.934 | D | 0.365 | neutral | N | 0.446485418 | None | None | N |
T/S | 0.122 | likely_benign | 0.1067 | benign | -1.076 | Destabilizing | 0.022 | N | 0.173 | neutral | N | 0.413834281 | None | None | N |
T/V | 0.1034 | likely_benign | 0.0886 | benign | -0.456 | Destabilizing | 0.029 | N | 0.177 | neutral | None | None | None | None | N |
T/W | 0.6958 | likely_pathogenic | 0.6305 | pathogenic | -0.849 | Destabilizing | 0.998 | D | 0.492 | neutral | None | None | None | None | N |
T/Y | 0.3442 | ambiguous | 0.278 | benign | -0.626 | Destabilizing | 0.991 | D | 0.451 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.