Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33008 | 99247;99248;99249 | chr2:178538807;178538806;178538805 | chr2:179403534;179403533;179403532 |
N2AB | 31367 | 94324;94325;94326 | chr2:178538807;178538806;178538805 | chr2:179403534;179403533;179403532 |
N2A | 30440 | 91543;91544;91545 | chr2:178538807;178538806;178538805 | chr2:179403534;179403533;179403532 |
N2B | 23943 | 72052;72053;72054 | chr2:178538807;178538806;178538805 | chr2:179403534;179403533;179403532 |
Novex-1 | 24068 | 72427;72428;72429 | chr2:178538807;178538806;178538805 | chr2:179403534;179403533;179403532 |
Novex-2 | 24135 | 72628;72629;72630 | chr2:178538807;178538806;178538805 | chr2:179403534;179403533;179403532 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs771594208 | None | 0.966 | N | 0.427 | 0.191 | 0.552698843619 | gnomAD-4.0.0 | 2.74186E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.60292E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1214 | likely_benign | 0.1379 | benign | -0.999 | Destabilizing | 0.525 | D | 0.404 | neutral | None | None | None | None | N |
L/C | 0.3087 | likely_benign | 0.3551 | ambiguous | -0.813 | Destabilizing | 0.998 | D | 0.429 | neutral | None | None | None | None | N |
L/D | 0.4561 | ambiguous | 0.5202 | ambiguous | -0.394 | Destabilizing | 0.949 | D | 0.475 | neutral | None | None | None | None | N |
L/E | 0.2434 | likely_benign | 0.2647 | benign | -0.448 | Destabilizing | 0.842 | D | 0.478 | neutral | None | None | None | None | N |
L/F | 0.107 | likely_benign | 0.133 | benign | -0.709 | Destabilizing | 0.966 | D | 0.427 | neutral | N | 0.511131542 | None | None | N |
L/G | 0.3161 | likely_benign | 0.3714 | ambiguous | -1.232 | Destabilizing | 0.842 | D | 0.467 | neutral | None | None | None | None | N |
L/H | 0.1309 | likely_benign | 0.1527 | benign | -0.338 | Destabilizing | 0.997 | D | 0.439 | neutral | N | 0.457721132 | None | None | N |
L/I | 0.0605 | likely_benign | 0.0591 | benign | -0.479 | Destabilizing | 0.022 | N | 0.091 | neutral | N | 0.441058168 | None | None | N |
L/K | 0.1834 | likely_benign | 0.2008 | benign | -0.663 | Destabilizing | 0.842 | D | 0.447 | neutral | None | None | None | None | N |
L/M | 0.0905 | likely_benign | 0.0881 | benign | -0.489 | Destabilizing | 0.974 | D | 0.467 | neutral | None | None | None | None | N |
L/N | 0.1864 | likely_benign | 0.2162 | benign | -0.504 | Destabilizing | 0.949 | D | 0.482 | neutral | None | None | None | None | N |
L/P | 0.5243 | ambiguous | 0.6369 | pathogenic | -0.619 | Destabilizing | 0.966 | D | 0.479 | neutral | N | 0.518500231 | None | None | N |
L/Q | 0.1039 | likely_benign | 0.1112 | benign | -0.717 | Destabilizing | 0.974 | D | 0.461 | neutral | None | None | None | None | N |
L/R | 0.1463 | likely_benign | 0.171 | benign | -0.04 | Destabilizing | 0.934 | D | 0.473 | neutral | N | 0.458297135 | None | None | N |
L/S | 0.1215 | likely_benign | 0.1442 | benign | -1.047 | Destabilizing | 0.728 | D | 0.424 | neutral | None | None | None | None | N |
L/T | 0.0862 | likely_benign | 0.0867 | benign | -0.988 | Destabilizing | 0.029 | N | 0.157 | neutral | None | None | None | None | N |
L/V | 0.0659 | likely_benign | 0.0627 | benign | -0.619 | Destabilizing | 0.022 | N | 0.107 | neutral | N | 0.408639105 | None | None | N |
L/W | 0.2461 | likely_benign | 0.3026 | benign | -0.708 | Destabilizing | 0.998 | D | 0.46 | neutral | None | None | None | None | N |
L/Y | 0.255 | likely_benign | 0.3148 | benign | -0.49 | Destabilizing | 0.991 | D | 0.467 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.