Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33023 | 99292;99293;99294 | chr2:178538762;178538761;178538760 | chr2:179403489;179403488;179403487 |
N2AB | 31382 | 94369;94370;94371 | chr2:178538762;178538761;178538760 | chr2:179403489;179403488;179403487 |
N2A | 30455 | 91588;91589;91590 | chr2:178538762;178538761;178538760 | chr2:179403489;179403488;179403487 |
N2B | 23958 | 72097;72098;72099 | chr2:178538762;178538761;178538760 | chr2:179403489;179403488;179403487 |
Novex-1 | 24083 | 72472;72473;72474 | chr2:178538762;178538761;178538760 | chr2:179403489;179403488;179403487 |
Novex-2 | 24150 | 72673;72674;72675 | chr2:178538762;178538761;178538760 | chr2:179403489;179403488;179403487 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs757929496 | 0.868 | 0.999 | N | 0.727 | 0.378 | 0.352262096564 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
E/K | rs757929496 | 0.868 | 0.999 | N | 0.727 | 0.378 | 0.352262096564 | gnomAD-4.0.0 | 1.59144E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85863E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1962 | likely_benign | 0.1888 | benign | -0.207 | Destabilizing | 0.999 | D | 0.667 | neutral | N | 0.482155429 | None | None | N |
E/C | 0.9143 | likely_pathogenic | 0.8976 | pathogenic | -0.001 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
E/D | 0.1542 | likely_benign | 0.1637 | benign | -0.252 | Destabilizing | 0.999 | D | 0.571 | neutral | N | 0.503320135 | None | None | N |
E/F | 0.8341 | likely_pathogenic | 0.8161 | pathogenic | -0.179 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/G | 0.2617 | likely_benign | 0.2429 | benign | -0.373 | Destabilizing | 1.0 | D | 0.641 | neutral | N | 0.468712666 | None | None | N |
E/H | 0.6457 | likely_pathogenic | 0.6067 | pathogenic | 0.135 | Stabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
E/I | 0.4311 | ambiguous | 0.4044 | ambiguous | 0.183 | Stabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
E/K | 0.2804 | likely_benign | 0.2397 | benign | 0.423 | Stabilizing | 0.999 | D | 0.727 | prob.delet. | N | 0.481461996 | None | None | N |
E/L | 0.4626 | ambiguous | 0.456 | ambiguous | 0.183 | Stabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
E/M | 0.6021 | likely_pathogenic | 0.5862 | pathogenic | 0.175 | Stabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
E/N | 0.3718 | ambiguous | 0.364 | ambiguous | 0.177 | Stabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
E/P | 0.6674 | likely_pathogenic | 0.662 | pathogenic | 0.072 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/Q | 0.2153 | likely_benign | 0.1968 | benign | 0.2 | Stabilizing | 1.0 | D | 0.663 | neutral | N | 0.469927207 | None | None | N |
E/R | 0.438 | ambiguous | 0.3737 | ambiguous | 0.596 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
E/S | 0.2465 | likely_benign | 0.238 | benign | 0.022 | Stabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/T | 0.2953 | likely_benign | 0.2786 | benign | 0.158 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
E/V | 0.2765 | likely_benign | 0.259 | benign | 0.072 | Stabilizing | 1.0 | D | 0.712 | prob.delet. | N | 0.506880515 | None | None | N |
E/W | 0.9526 | likely_pathogenic | 0.9404 | pathogenic | -0.079 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
E/Y | 0.7661 | likely_pathogenic | 0.7415 | pathogenic | 0.057 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.