Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33031 | 99316;99317;99318 | chr2:178538738;178538737;178538736 | chr2:179403465;179403464;179403463 |
N2AB | 31390 | 94393;94394;94395 | chr2:178538738;178538737;178538736 | chr2:179403465;179403464;179403463 |
N2A | 30463 | 91612;91613;91614 | chr2:178538738;178538737;178538736 | chr2:179403465;179403464;179403463 |
N2B | 23966 | 72121;72122;72123 | chr2:178538738;178538737;178538736 | chr2:179403465;179403464;179403463 |
Novex-1 | 24091 | 72496;72497;72498 | chr2:178538738;178538737;178538736 | chr2:179403465;179403464;179403463 |
Novex-2 | 24158 | 72697;72698;72699 | chr2:178538738;178538737;178538736 | chr2:179403465;179403464;179403463 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.1 | N | 0.206 | 0.053 | 0.40749426699 | gnomAD-4.0.0 | 1.59141E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43287E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1693 | likely_benign | 0.1872 | benign | -0.953 | Destabilizing | 0.953 | D | 0.531 | neutral | None | None | None | None | N |
L/C | 0.5167 | ambiguous | 0.5354 | ambiguous | -0.589 | Destabilizing | 0.999 | D | 0.72 | prob.delet. | None | None | None | None | N |
L/D | 0.7071 | likely_pathogenic | 0.7141 | pathogenic | -0.468 | Destabilizing | 0.986 | D | 0.82 | deleterious | None | None | None | None | N |
L/E | 0.3376 | likely_benign | 0.3355 | benign | -0.54 | Destabilizing | 0.973 | D | 0.734 | prob.delet. | None | None | None | None | N |
L/F | 0.1917 | likely_benign | 0.2239 | benign | -0.769 | Destabilizing | 0.982 | D | 0.656 | neutral | N | 0.488778704 | None | None | N |
L/G | 0.5181 | ambiguous | 0.5617 | ambiguous | -1.172 | Destabilizing | 0.993 | D | 0.819 | deleterious | None | None | None | None | N |
L/H | 0.2425 | likely_benign | 0.2663 | benign | -0.385 | Destabilizing | 0.998 | D | 0.788 | deleterious | N | 0.480638403 | None | None | N |
L/I | 0.0843 | likely_benign | 0.0848 | benign | -0.474 | Destabilizing | 0.1 | N | 0.206 | neutral | N | 0.480059273 | None | None | N |
L/K | 0.2777 | likely_benign | 0.2687 | benign | -0.606 | Destabilizing | 0.973 | D | 0.708 | prob.delet. | None | None | None | None | N |
L/M | 0.1131 | likely_benign | 0.1203 | benign | -0.41 | Destabilizing | 0.986 | D | 0.653 | neutral | None | None | None | None | N |
L/N | 0.3493 | ambiguous | 0.3788 | ambiguous | -0.305 | Destabilizing | 0.993 | D | 0.822 | deleterious | None | None | None | None | N |
L/P | 0.8219 | likely_pathogenic | 0.8474 | pathogenic | -0.6 | Destabilizing | 0.997 | D | 0.82 | deleterious | N | 0.495615559 | None | None | N |
L/Q | 0.1271 | likely_benign | 0.1406 | benign | -0.55 | Destabilizing | 0.807 | D | 0.435 | neutral | None | None | None | None | N |
L/R | 0.2129 | likely_benign | 0.2215 | benign | 0.017 | Stabilizing | 0.982 | D | 0.792 | deleterious | N | 0.487254605 | None | None | N |
L/S | 0.1947 | likely_benign | 0.2116 | benign | -0.8 | Destabilizing | 0.986 | D | 0.671 | neutral | None | None | None | None | N |
L/T | 0.1074 | likely_benign | 0.1063 | benign | -0.764 | Destabilizing | 0.986 | D | 0.673 | neutral | None | None | None | None | N |
L/V | 0.0892 | likely_benign | 0.0924 | benign | -0.6 | Destabilizing | 0.76 | D | 0.495 | neutral | N | 0.494641937 | None | None | N |
L/W | 0.4029 | ambiguous | 0.4409 | ambiguous | -0.774 | Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
L/Y | 0.4642 | ambiguous | 0.5249 | ambiguous | -0.557 | Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.