Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33074 | 99445;99446;99447 | chr2:178538609;178538608;178538607 | chr2:179403336;179403335;179403334 |
N2AB | 31433 | 94522;94523;94524 | chr2:178538609;178538608;178538607 | chr2:179403336;179403335;179403334 |
N2A | 30506 | 91741;91742;91743 | chr2:178538609;178538608;178538607 | chr2:179403336;179403335;179403334 |
N2B | 24009 | 72250;72251;72252 | chr2:178538609;178538608;178538607 | chr2:179403336;179403335;179403334 |
Novex-1 | 24134 | 72625;72626;72627 | chr2:178538609;178538608;178538607 | chr2:179403336;179403335;179403334 |
Novex-2 | 24201 | 72826;72827;72828 | chr2:178538609;178538608;178538607 | chr2:179403336;179403335;179403334 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs1692851858 | None | 0.454 | N | 0.735 | 0.18 | 0.366277470483 | gnomAD-4.0.0 | 1.59164E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.773E-05 | None | 0 | 0 | 0 | 0 | 0 |
F/S | rs1328730203 | None | 0.051 | N | 0.53 | 0.295 | 0.512942373286 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.82E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
F/S | rs1328730203 | None | 0.051 | N | 0.53 | 0.295 | 0.512942373286 | gnomAD-4.0.0 | 2.47887E-06 | None | None | None | None | N | None | 5.33974E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.6985 | likely_pathogenic | 0.7549 | pathogenic | -3.002 | Highly Destabilizing | 0.525 | D | 0.718 | prob.delet. | None | None | None | None | N |
F/C | 0.4608 | ambiguous | 0.5388 | ambiguous | -1.582 | Destabilizing | 0.997 | D | 0.74 | deleterious | N | 0.518076157 | None | None | N |
F/D | 0.9723 | likely_pathogenic | 0.977 | pathogenic | -3.132 | Highly Destabilizing | 0.949 | D | 0.75 | deleterious | None | None | None | None | N |
F/E | 0.9658 | likely_pathogenic | 0.9713 | pathogenic | -2.967 | Highly Destabilizing | 0.949 | D | 0.755 | deleterious | None | None | None | None | N |
F/G | 0.9208 | likely_pathogenic | 0.9406 | pathogenic | -3.395 | Highly Destabilizing | 0.728 | D | 0.748 | deleterious | None | None | None | None | N |
F/H | 0.7489 | likely_pathogenic | 0.8002 | pathogenic | -1.772 | Destabilizing | 0.998 | D | 0.749 | deleterious | None | None | None | None | N |
F/I | 0.3488 | ambiguous | 0.3879 | ambiguous | -1.72 | Destabilizing | 0.051 | N | 0.54 | neutral | N | 0.469532849 | None | None | N |
F/K | 0.9529 | likely_pathogenic | 0.9584 | pathogenic | -1.988 | Destabilizing | 0.949 | D | 0.75 | deleterious | None | None | None | None | N |
F/L | 0.8299 | likely_pathogenic | 0.8718 | pathogenic | -1.72 | Destabilizing | 0.454 | N | 0.735 | prob.delet. | N | 0.466127184 | None | None | N |
F/M | 0.5678 | likely_pathogenic | 0.6088 | pathogenic | -1.251 | Destabilizing | 0.974 | D | 0.781 | deleterious | None | None | None | None | N |
F/N | 0.8485 | likely_pathogenic | 0.8761 | pathogenic | -2.302 | Highly Destabilizing | 0.949 | D | 0.763 | deleterious | None | None | None | None | N |
F/P | 0.9991 | likely_pathogenic | 0.9993 | pathogenic | -2.157 | Highly Destabilizing | 0.974 | D | 0.796 | deleterious | None | None | None | None | N |
F/Q | 0.8967 | likely_pathogenic | 0.9155 | pathogenic | -2.357 | Highly Destabilizing | 0.974 | D | 0.787 | deleterious | None | None | None | None | N |
F/R | 0.8994 | likely_pathogenic | 0.9094 | pathogenic | -1.33 | Destabilizing | 0.949 | D | 0.793 | deleterious | None | None | None | None | N |
F/S | 0.573 | likely_pathogenic | 0.6465 | pathogenic | -2.929 | Highly Destabilizing | 0.051 | N | 0.53 | neutral | N | 0.449330935 | None | None | N |
F/T | 0.6307 | likely_pathogenic | 0.6878 | pathogenic | -2.673 | Highly Destabilizing | 0.728 | D | 0.725 | prob.delet. | None | None | None | None | N |
F/V | 0.356 | ambiguous | 0.4129 | ambiguous | -2.157 | Highly Destabilizing | 0.669 | D | 0.736 | prob.delet. | N | 0.480864563 | None | None | N |
F/W | 0.6552 | likely_pathogenic | 0.6831 | pathogenic | -0.622 | Destabilizing | 0.998 | D | 0.764 | deleterious | None | None | None | None | N |
F/Y | 0.2543 | likely_benign | 0.2729 | benign | -1.006 | Destabilizing | 0.961 | D | 0.699 | prob.neutral | N | 0.500431759 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.