Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33078 | 99457;99458;99459 | chr2:178538597;178538596;178538595 | chr2:179403324;179403323;179403322 |
N2AB | 31437 | 94534;94535;94536 | chr2:178538597;178538596;178538595 | chr2:179403324;179403323;179403322 |
N2A | 30510 | 91753;91754;91755 | chr2:178538597;178538596;178538595 | chr2:179403324;179403323;179403322 |
N2B | 24013 | 72262;72263;72264 | chr2:178538597;178538596;178538595 | chr2:179403324;179403323;179403322 |
Novex-1 | 24138 | 72637;72638;72639 | chr2:178538597;178538596;178538595 | chr2:179403324;179403323;179403322 |
Novex-2 | 24205 | 72838;72839;72840 | chr2:178538597;178538596;178538595 | chr2:179403324;179403323;179403322 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs771047688 | 0.716 | 0.885 | N | 0.454 | 0.249 | 0.272205846399 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
E/K | rs771047688 | 0.716 | 0.885 | N | 0.454 | 0.249 | 0.272205846399 | gnomAD-4.0.0 | 1.59165E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85892E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1855 | likely_benign | 0.2207 | benign | -0.213 | Destabilizing | 0.939 | D | 0.511 | neutral | N | 0.45040837 | None | None | I |
E/C | 0.9225 | likely_pathogenic | 0.9385 | pathogenic | 0.034 | Stabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | I |
E/D | 0.1549 | likely_benign | 0.1883 | benign | -0.257 | Destabilizing | 0.939 | D | 0.415 | neutral | N | 0.459182569 | None | None | I |
E/F | 0.9051 | likely_pathogenic | 0.9265 | pathogenic | -0.147 | Destabilizing | 0.993 | D | 0.609 | neutral | None | None | None | None | I |
E/G | 0.228 | likely_benign | 0.2731 | benign | -0.384 | Destabilizing | 0.982 | D | 0.469 | neutral | N | 0.475589242 | None | None | I |
E/H | 0.6608 | likely_pathogenic | 0.7225 | pathogenic | 0.18 | Stabilizing | 0.998 | D | 0.371 | neutral | None | None | None | None | I |
E/I | 0.5194 | ambiguous | 0.5772 | pathogenic | 0.194 | Stabilizing | 0.973 | D | 0.539 | neutral | None | None | None | None | I |
E/K | 0.2137 | likely_benign | 0.258 | benign | 0.486 | Stabilizing | 0.885 | D | 0.454 | neutral | N | 0.483790225 | None | None | I |
E/L | 0.5931 | likely_pathogenic | 0.6666 | pathogenic | 0.194 | Stabilizing | 0.91 | D | 0.552 | neutral | None | None | None | None | I |
E/M | 0.6477 | likely_pathogenic | 0.706 | pathogenic | 0.215 | Stabilizing | 0.998 | D | 0.563 | neutral | None | None | None | None | I |
E/N | 0.3775 | ambiguous | 0.4608 | ambiguous | 0.156 | Stabilizing | 0.986 | D | 0.387 | neutral | None | None | None | None | I |
E/P | 0.6132 | likely_pathogenic | 0.6782 | pathogenic | 0.078 | Stabilizing | 0.993 | D | 0.468 | neutral | None | None | None | None | I |
E/Q | 0.2029 | likely_benign | 0.2433 | benign | 0.198 | Stabilizing | 0.322 | N | 0.363 | neutral | N | 0.508648597 | None | None | I |
E/R | 0.3861 | ambiguous | 0.4521 | ambiguous | 0.655 | Stabilizing | 0.973 | D | 0.385 | neutral | None | None | None | None | I |
E/S | 0.2584 | likely_benign | 0.3119 | benign | 0.024 | Stabilizing | 0.953 | D | 0.443 | neutral | None | None | None | None | I |
E/T | 0.3315 | likely_benign | 0.395 | ambiguous | 0.171 | Stabilizing | 0.953 | D | 0.471 | neutral | None | None | None | None | I |
E/V | 0.3352 | likely_benign | 0.3836 | ambiguous | 0.078 | Stabilizing | 0.322 | N | 0.488 | neutral | N | 0.466436615 | None | None | I |
E/W | 0.9672 | likely_pathogenic | 0.9768 | pathogenic | -0.035 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | I |
E/Y | 0.8254 | likely_pathogenic | 0.865 | pathogenic | 0.093 | Stabilizing | 0.998 | D | 0.575 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.