Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33132 | 99619;99620;99621 | chr2:178537813;178537812;178537811 | chr2:179402540;179402539;179402538 |
N2AB | 31491 | 94696;94697;94698 | chr2:178537813;178537812;178537811 | chr2:179402540;179402539;179402538 |
N2A | 30564 | 91915;91916;91917 | chr2:178537813;178537812;178537811 | chr2:179402540;179402539;179402538 |
N2B | 24067 | 72424;72425;72426 | chr2:178537813;178537812;178537811 | chr2:179402540;179402539;179402538 |
Novex-1 | 24192 | 72799;72800;72801 | chr2:178537813;178537812;178537811 | chr2:179402540;179402539;179402538 |
Novex-2 | 24259 | 73000;73001;73002 | chr2:178537813;178537812;178537811 | chr2:179402540;179402539;179402538 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs780831102 | -0.838 | 0.955 | N | 0.405 | 0.469 | 0.700996906393 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
I/L | rs780831102 | -0.838 | 0.955 | N | 0.405 | 0.469 | 0.700996906393 | gnomAD-4.0.0 | 5.47402E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19606E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9191 | likely_pathogenic | 0.945 | pathogenic | -2.044 | Highly Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
I/C | 0.9393 | likely_pathogenic | 0.9536 | pathogenic | -0.935 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
I/D | 0.9975 | likely_pathogenic | 0.9977 | pathogenic | -1.899 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
I/E | 0.9912 | likely_pathogenic | 0.9916 | pathogenic | -1.856 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
I/F | 0.6542 | likely_pathogenic | 0.6525 | pathogenic | -1.44 | Destabilizing | 1.0 | D | 0.765 | deleterious | N | 0.494248975 | None | None | N |
I/G | 0.9902 | likely_pathogenic | 0.9924 | pathogenic | -2.412 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
I/H | 0.9881 | likely_pathogenic | 0.9894 | pathogenic | -1.783 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
I/K | 0.9775 | likely_pathogenic | 0.9751 | pathogenic | -1.498 | Destabilizing | 0.998 | D | 0.858 | deleterious | None | None | None | None | N |
I/L | 0.3586 | ambiguous | 0.3888 | ambiguous | -1.061 | Destabilizing | 0.955 | D | 0.405 | neutral | N | 0.516132796 | None | None | N |
I/M | 0.2984 | likely_benign | 0.3028 | benign | -0.654 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | N | 0.507442159 | None | None | N |
I/N | 0.9562 | likely_pathogenic | 0.9566 | pathogenic | -1.254 | Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.529180492 | None | None | N |
I/P | 0.993 | likely_pathogenic | 0.9936 | pathogenic | -1.362 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
I/Q | 0.9817 | likely_pathogenic | 0.9823 | pathogenic | -1.398 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
I/R | 0.972 | likely_pathogenic | 0.9687 | pathogenic | -0.922 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
I/S | 0.9374 | likely_pathogenic | 0.9456 | pathogenic | -1.788 | Destabilizing | 1.0 | D | 0.845 | deleterious | D | 0.535674952 | None | None | N |
I/T | 0.8164 | likely_pathogenic | 0.8523 | pathogenic | -1.635 | Destabilizing | 1.0 | D | 0.767 | deleterious | N | 0.507442159 | None | None | N |
I/V | 0.1268 | likely_benign | 0.1401 | benign | -1.362 | Destabilizing | 0.966 | D | 0.356 | neutral | N | 0.408393963 | None | None | N |
I/W | 0.9903 | likely_pathogenic | 0.9905 | pathogenic | -1.62 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
I/Y | 0.9694 | likely_pathogenic | 0.9672 | pathogenic | -1.42 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.