Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33148 | 99667;99668;99669 | chr2:178537765;178537764;178537763 | chr2:179402492;179402491;179402490 |
N2AB | 31507 | 94744;94745;94746 | chr2:178537765;178537764;178537763 | chr2:179402492;179402491;179402490 |
N2A | 30580 | 91963;91964;91965 | chr2:178537765;178537764;178537763 | chr2:179402492;179402491;179402490 |
N2B | 24083 | 72472;72473;72474 | chr2:178537765;178537764;178537763 | chr2:179402492;179402491;179402490 |
Novex-1 | 24208 | 72847;72848;72849 | chr2:178537765;178537764;178537763 | chr2:179402492;179402491;179402490 |
Novex-2 | 24275 | 73048;73049;73050 | chr2:178537765;178537764;178537763 | chr2:179402492;179402491;179402490 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 1.0 | D | 0.679 | 0.39 | 0.225215365344 | gnomAD-4.0.0 | 1.59135E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85843E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5672 | likely_pathogenic | 0.6551 | pathogenic | -0.291 | Destabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | N |
K/C | 0.8226 | likely_pathogenic | 0.8655 | pathogenic | -0.231 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
K/D | 0.8288 | likely_pathogenic | 0.8542 | pathogenic | -0.091 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
K/E | 0.3356 | likely_benign | 0.3997 | ambiguous | -0.062 | Destabilizing | 0.999 | D | 0.568 | neutral | N | 0.484862952 | None | None | N |
K/F | 0.8941 | likely_pathogenic | 0.9194 | pathogenic | -0.476 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
K/G | 0.733 | likely_pathogenic | 0.8047 | pathogenic | -0.557 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
K/H | 0.3742 | ambiguous | 0.4276 | ambiguous | -1.08 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/I | 0.5214 | ambiguous | 0.5575 | ambiguous | 0.349 | Stabilizing | 0.996 | D | 0.772 | deleterious | N | 0.521074469 | None | None | N |
K/L | 0.5319 | ambiguous | 0.5909 | pathogenic | 0.349 | Stabilizing | 0.997 | D | 0.675 | prob.neutral | None | None | None | None | N |
K/M | 0.4058 | ambiguous | 0.4691 | ambiguous | 0.506 | Stabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
K/N | 0.648 | likely_pathogenic | 0.703 | pathogenic | 0.054 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | D | 0.522034474 | None | None | N |
K/P | 0.9836 | likely_pathogenic | 0.9876 | pathogenic | 0.165 | Stabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
K/Q | 0.1528 | likely_benign | 0.1935 | benign | -0.212 | Destabilizing | 0.999 | D | 0.656 | neutral | N | 0.4968881 | None | None | N |
K/R | 0.0819 | likely_benign | 0.0914 | benign | -0.196 | Destabilizing | 0.998 | D | 0.531 | neutral | N | 0.481996006 | None | None | N |
K/S | 0.5967 | likely_pathogenic | 0.6727 | pathogenic | -0.546 | Destabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | N |
K/T | 0.2859 | likely_benign | 0.3433 | ambiguous | -0.347 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.462468882 | None | None | N |
K/V | 0.4837 | ambiguous | 0.5244 | ambiguous | 0.165 | Stabilizing | 0.998 | D | 0.739 | prob.delet. | None | None | None | None | N |
K/W | 0.8841 | likely_pathogenic | 0.9189 | pathogenic | -0.386 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
K/Y | 0.8132 | likely_pathogenic | 0.8417 | pathogenic | -0.018 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.