Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33160 | 99703;99704;99705 | chr2:178537729;178537728;178537727 | chr2:179402456;179402455;179402454 |
N2AB | 31519 | 94780;94781;94782 | chr2:178537729;178537728;178537727 | chr2:179402456;179402455;179402454 |
N2A | 30592 | 91999;92000;92001 | chr2:178537729;178537728;178537727 | chr2:179402456;179402455;179402454 |
N2B | 24095 | 72508;72509;72510 | chr2:178537729;178537728;178537727 | chr2:179402456;179402455;179402454 |
Novex-1 | 24220 | 72883;72884;72885 | chr2:178537729;178537728;178537727 | chr2:179402456;179402455;179402454 |
Novex-2 | 24287 | 73084;73085;73086 | chr2:178537729;178537728;178537727 | chr2:179402456;179402455;179402454 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs794729553 | None | 0.023 | N | 0.272 | 0.077 | 0.286081765059 | gnomAD-4.0.0 | 2.73691E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59789E-06 | 0 | 0 |
V/L | None | None | 0.175 | N | 0.549 | 0.138 | 0.538283067721 | gnomAD-4.0.0 | 2.73691E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59789E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.818 | likely_pathogenic | 0.8575 | pathogenic | -2.378 | Highly Destabilizing | 0.95 | D | 0.641 | neutral | N | 0.505788955 | None | None | N |
V/C | 0.9489 | likely_pathogenic | 0.9579 | pathogenic | -2.077 | Highly Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
V/D | 0.9949 | likely_pathogenic | 0.9967 | pathogenic | -3.437 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
V/E | 0.9845 | likely_pathogenic | 0.9892 | pathogenic | -3.136 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | N | 0.518070314 | None | None | N |
V/F | 0.5426 | ambiguous | 0.6521 | pathogenic | -1.323 | Destabilizing | 0.994 | D | 0.815 | deleterious | None | None | None | None | N |
V/G | 0.9337 | likely_pathogenic | 0.9564 | pathogenic | -2.995 | Highly Destabilizing | 0.998 | D | 0.886 | deleterious | N | 0.518070314 | None | None | N |
V/H | 0.9925 | likely_pathogenic | 0.9949 | pathogenic | -2.893 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
V/I | 0.0776 | likely_benign | 0.0781 | benign | -0.596 | Destabilizing | 0.023 | N | 0.272 | neutral | N | 0.355628553 | None | None | N |
V/K | 0.9877 | likely_pathogenic | 0.9902 | pathogenic | -2.025 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
V/L | 0.3428 | ambiguous | 0.408 | ambiguous | -0.596 | Destabilizing | 0.175 | N | 0.549 | neutral | N | 0.414885579 | None | None | N |
V/M | 0.3722 | ambiguous | 0.461 | ambiguous | -0.864 | Destabilizing | 0.992 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/N | 0.9822 | likely_pathogenic | 0.9884 | pathogenic | -2.639 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
V/P | 0.9933 | likely_pathogenic | 0.9951 | pathogenic | -1.169 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
V/Q | 0.9825 | likely_pathogenic | 0.987 | pathogenic | -2.323 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
V/R | 0.981 | likely_pathogenic | 0.9848 | pathogenic | -2.04 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
V/S | 0.9556 | likely_pathogenic | 0.9675 | pathogenic | -3.205 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
V/T | 0.8981 | likely_pathogenic | 0.9137 | pathogenic | -2.743 | Highly Destabilizing | 0.997 | D | 0.742 | deleterious | None | None | None | None | N |
V/W | 0.9909 | likely_pathogenic | 0.9953 | pathogenic | -1.959 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
V/Y | 0.9635 | likely_pathogenic | 0.9772 | pathogenic | -1.61 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.