Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33208 | 99847;99848;99849 | chr2:178537585;178537584;178537583 | chr2:179402312;179402311;179402310 |
N2AB | 31567 | 94924;94925;94926 | chr2:178537585;178537584;178537583 | chr2:179402312;179402311;179402310 |
N2A | 30640 | 92143;92144;92145 | chr2:178537585;178537584;178537583 | chr2:179402312;179402311;179402310 |
N2B | 24143 | 72652;72653;72654 | chr2:178537585;178537584;178537583 | chr2:179402312;179402311;179402310 |
Novex-1 | 24268 | 73027;73028;73029 | chr2:178537585;178537584;178537583 | chr2:179402312;179402311;179402310 |
Novex-2 | 24335 | 73228;73229;73230 | chr2:178537585;178537584;178537583 | chr2:179402312;179402311;179402310 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 0.922 | N | 0.581 | 0.371 | 0.52540932818 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0771 | likely_benign | 0.1029 | benign | -0.551 | Destabilizing | None | N | 0.289 | neutral | N | 0.353963967 | None | None | N |
G/C | 0.2336 | likely_benign | 0.2986 | benign | -0.839 | Destabilizing | 0.978 | D | 0.589 | neutral | None | None | None | None | N |
G/D | 0.7506 | likely_pathogenic | 0.7664 | pathogenic | -0.674 | Destabilizing | 0.922 | D | 0.597 | neutral | None | None | None | None | N |
G/E | 0.6946 | likely_pathogenic | 0.702 | pathogenic | -0.731 | Destabilizing | 0.922 | D | 0.576 | neutral | N | 0.408993317 | None | None | N |
G/F | 0.8253 | likely_pathogenic | 0.8462 | pathogenic | -0.845 | Destabilizing | 0.969 | D | 0.61 | neutral | None | None | None | None | N |
G/H | 0.7943 | likely_pathogenic | 0.8145 | pathogenic | -1.132 | Destabilizing | 0.997 | D | 0.569 | neutral | None | None | None | None | N |
G/I | 0.4116 | ambiguous | 0.4869 | ambiguous | -0.176 | Destabilizing | 0.056 | N | 0.5 | neutral | None | None | None | None | N |
G/K | 0.8488 | likely_pathogenic | 0.8435 | pathogenic | -1.056 | Destabilizing | 0.94 | D | 0.583 | neutral | None | None | None | None | N |
G/L | 0.6019 | likely_pathogenic | 0.6634 | pathogenic | -0.176 | Destabilizing | 0.48 | N | 0.585 | neutral | None | None | None | None | N |
G/M | 0.6449 | likely_pathogenic | 0.695 | pathogenic | -0.243 | Destabilizing | 0.969 | D | 0.596 | neutral | None | None | None | None | N |
G/N | 0.7257 | likely_pathogenic | 0.7573 | pathogenic | -0.731 | Destabilizing | 0.969 | D | 0.641 | neutral | None | None | None | None | N |
G/P | 0.9586 | likely_pathogenic | 0.9595 | pathogenic | -0.259 | Destabilizing | 0.922 | D | 0.579 | neutral | None | None | None | None | N |
G/Q | 0.7297 | likely_pathogenic | 0.75 | pathogenic | -0.877 | Destabilizing | 0.969 | D | 0.603 | neutral | None | None | None | None | N |
G/R | 0.7102 | likely_pathogenic | 0.7323 | pathogenic | -0.808 | Destabilizing | 0.922 | D | 0.581 | neutral | N | 0.390234198 | None | None | N |
G/S | 0.1474 | likely_benign | 0.1863 | benign | -1.041 | Destabilizing | 0.281 | N | 0.604 | neutral | None | None | None | None | N |
G/T | 0.2045 | likely_benign | 0.2478 | benign | -1.007 | Destabilizing | 0.817 | D | 0.559 | neutral | None | None | None | None | N |
G/V | 0.2385 | likely_benign | 0.3099 | benign | -0.259 | Destabilizing | 0.41 | N | 0.598 | neutral | N | 0.313554565 | None | None | N |
G/W | 0.8318 | likely_pathogenic | 0.8485 | pathogenic | -1.201 | Destabilizing | 0.997 | D | 0.597 | neutral | None | None | None | None | N |
G/Y | 0.7906 | likely_pathogenic | 0.8243 | pathogenic | -0.763 | Destabilizing | 0.99 | D | 0.603 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.