Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33243 | 99952;99953;99954 | chr2:178537480;178537479;178537478 | chr2:179402207;179402206;179402205 |
N2AB | 31602 | 95029;95030;95031 | chr2:178537480;178537479;178537478 | chr2:179402207;179402206;179402205 |
N2A | 30675 | 92248;92249;92250 | chr2:178537480;178537479;178537478 | chr2:179402207;179402206;179402205 |
N2B | 24178 | 72757;72758;72759 | chr2:178537480;178537479;178537478 | chr2:179402207;179402206;179402205 |
Novex-1 | 24303 | 73132;73133;73134 | chr2:178537480;178537479;178537478 | chr2:179402207;179402206;179402205 |
Novex-2 | 24370 | 73333;73334;73335 | chr2:178537480;178537479;178537478 | chr2:179402207;179402206;179402205 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.851 | N | 0.631 | 0.18 | 0.557129077062 | gnomAD-4.0.0 | 1.59163E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85876E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4553 | ambiguous | 0.5259 | ambiguous | -2.353 | Highly Destabilizing | 0.03 | N | 0.341 | neutral | None | None | None | None | N |
I/C | 0.6575 | likely_pathogenic | 0.7236 | pathogenic | -1.656 | Destabilizing | 0.975 | D | 0.624 | neutral | None | None | None | None | N |
I/D | 0.8863 | likely_pathogenic | 0.8801 | pathogenic | -2.472 | Highly Destabilizing | 0.95 | D | 0.677 | prob.neutral | None | None | None | None | N |
I/E | 0.7895 | likely_pathogenic | 0.7582 | pathogenic | -2.417 | Highly Destabilizing | 0.8 | D | 0.636 | neutral | None | None | None | None | N |
I/F | 0.2134 | likely_benign | 0.2585 | benign | -1.745 | Destabilizing | 0.851 | D | 0.631 | neutral | N | 0.484900238 | None | None | N |
I/G | 0.8274 | likely_pathogenic | 0.8694 | pathogenic | -2.755 | Highly Destabilizing | 0.844 | D | 0.627 | neutral | None | None | None | None | N |
I/H | 0.7218 | likely_pathogenic | 0.7349 | pathogenic | -2.044 | Highly Destabilizing | 0.995 | D | 0.623 | neutral | None | None | None | None | N |
I/K | 0.6626 | likely_pathogenic | 0.6598 | pathogenic | -1.759 | Destabilizing | 0.138 | N | 0.641 | neutral | None | None | None | None | N |
I/L | 0.1642 | likely_benign | 0.1811 | benign | -1.257 | Destabilizing | 0.011 | N | 0.371 | neutral | N | 0.491460851 | None | None | N |
I/M | 0.1232 | likely_benign | 0.1295 | benign | -0.94 | Destabilizing | 0.632 | D | 0.623 | neutral | N | 0.508451888 | None | None | N |
I/N | 0.4741 | ambiguous | 0.4662 | ambiguous | -1.699 | Destabilizing | 0.935 | D | 0.655 | neutral | N | 0.490393725 | None | None | N |
I/P | 0.9643 | likely_pathogenic | 0.9733 | pathogenic | -1.597 | Destabilizing | 0.975 | D | 0.673 | neutral | None | None | None | None | N |
I/Q | 0.6787 | likely_pathogenic | 0.6672 | pathogenic | -1.853 | Destabilizing | 0.941 | D | 0.663 | neutral | None | None | None | None | N |
I/R | 0.5536 | ambiguous | 0.5664 | pathogenic | -1.14 | Destabilizing | 0.883 | D | 0.656 | neutral | None | None | None | None | N |
I/S | 0.4746 | ambiguous | 0.5079 | ambiguous | -2.318 | Highly Destabilizing | 0.672 | D | 0.591 | neutral | N | 0.516436653 | None | None | N |
I/T | 0.2323 | likely_benign | 0.236 | benign | -2.142 | Highly Destabilizing | 0.004 | N | 0.359 | neutral | N | 0.483497515 | None | None | N |
I/V | 0.078 | likely_benign | 0.0872 | benign | -1.597 | Destabilizing | None | N | 0.16 | neutral | N | 0.440127953 | None | None | N |
I/W | 0.864 | likely_pathogenic | 0.8817 | pathogenic | -1.933 | Destabilizing | 0.998 | D | 0.642 | neutral | None | None | None | None | N |
I/Y | 0.5826 | likely_pathogenic | 0.6134 | pathogenic | -1.731 | Destabilizing | 0.643 | D | 0.665 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.