Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33265 | 100018;100019;100020 | chr2:178537414;178537413;178537412 | chr2:179402141;179402140;179402139 |
N2AB | 31624 | 95095;95096;95097 | chr2:178537414;178537413;178537412 | chr2:179402141;179402140;179402139 |
N2A | 30697 | 92314;92315;92316 | chr2:178537414;178537413;178537412 | chr2:179402141;179402140;179402139 |
N2B | 24200 | 72823;72824;72825 | chr2:178537414;178537413;178537412 | chr2:179402141;179402140;179402139 |
Novex-1 | 24325 | 73198;73199;73200 | chr2:178537414;178537413;178537412 | chr2:179402141;179402140;179402139 |
Novex-2 | 24392 | 73399;73400;73401 | chr2:178537414;178537413;178537412 | chr2:179402141;179402140;179402139 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.631 | N | 0.335 | 0.12 | 0.212008924253 | gnomAD-4.0.0 | 6.8572E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.01297E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5833 | likely_pathogenic | 0.6135 | pathogenic | -0.827 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
A/D | 0.5674 | likely_pathogenic | 0.5608 | ambiguous | -1.064 | Destabilizing | 0.997 | D | 0.785 | deleterious | N | 0.486657516 | None | None | N |
A/E | 0.3985 | ambiguous | 0.3742 | ambiguous | -1.045 | Destabilizing | 0.998 | D | 0.695 | prob.neutral | None | None | None | None | N |
A/F | 0.5026 | ambiguous | 0.5238 | ambiguous | -0.911 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
A/G | 0.1589 | likely_benign | 0.1649 | benign | -1.206 | Destabilizing | 0.804 | D | 0.43 | neutral | N | 0.483036156 | None | None | N |
A/H | 0.6376 | likely_pathogenic | 0.6403 | pathogenic | -1.413 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
A/I | 0.4108 | ambiguous | 0.4223 | ambiguous | -0.171 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
A/K | 0.5162 | ambiguous | 0.5069 | ambiguous | -1.037 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | N |
A/L | 0.3333 | likely_benign | 0.3225 | benign | -0.171 | Destabilizing | 0.998 | D | 0.562 | neutral | None | None | None | None | N |
A/M | 0.3573 | ambiguous | 0.3694 | ambiguous | -0.157 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
A/N | 0.4662 | ambiguous | 0.4711 | ambiguous | -0.848 | Destabilizing | 0.979 | D | 0.806 | deleterious | None | None | None | None | N |
A/P | 0.8431 | likely_pathogenic | 0.8482 | pathogenic | -0.368 | Destabilizing | 0.998 | D | 0.797 | deleterious | N | 0.499281269 | None | None | N |
A/Q | 0.4141 | ambiguous | 0.3936 | ambiguous | -0.924 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
A/R | 0.398 | ambiguous | 0.383 | ambiguous | -0.816 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
A/S | 0.1086 | likely_benign | 0.1093 | benign | -1.278 | Destabilizing | 0.077 | N | 0.355 | neutral | N | 0.45736692 | None | None | N |
A/T | 0.1199 | likely_benign | 0.1225 | benign | -1.151 | Destabilizing | 0.631 | D | 0.335 | neutral | N | 0.483689516 | None | None | N |
A/V | 0.2169 | likely_benign | 0.219 | benign | -0.368 | Destabilizing | 0.992 | D | 0.479 | neutral | N | 0.486911005 | None | None | N |
A/W | 0.8809 | likely_pathogenic | 0.8807 | pathogenic | -1.344 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
A/Y | 0.6854 | likely_pathogenic | 0.7015 | pathogenic | -0.881 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.