Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33291 | 100096;100097;100098 | chr2:178537238;178537237;178537236 | chr2:179401965;179401964;179401963 |
N2AB | 31650 | 95173;95174;95175 | chr2:178537238;178537237;178537236 | chr2:179401965;179401964;179401963 |
N2A | 30723 | 92392;92393;92394 | chr2:178537238;178537237;178537236 | chr2:179401965;179401964;179401963 |
N2B | 24226 | 72901;72902;72903 | chr2:178537238;178537237;178537236 | chr2:179401965;179401964;179401963 |
Novex-1 | 24351 | 73276;73277;73278 | chr2:178537238;178537237;178537236 | chr2:179401965;179401964;179401963 |
Novex-2 | 24418 | 73477;73478;73479 | chr2:178537238;178537237;178537236 | chr2:179401965;179401964;179401963 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/Q | None | None | 1.0 | D | 0.857 | 0.744 | 0.832103877067 | gnomAD-4.0.0 | 1.6557E-06 | None | None | None | None | I | None | 0 | 2.44439E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.8595 | likely_pathogenic | 0.8576 | pathogenic | -1.358 | Destabilizing | 0.999 | D | 0.815 | deleterious | D | 0.631896343 | None | None | I |
P/C | 0.9898 | likely_pathogenic | 0.9918 | pathogenic | -2.117 | Highly Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
P/D | 0.9992 | likely_pathogenic | 0.9992 | pathogenic | -3.51 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
P/E | 0.9974 | likely_pathogenic | 0.9975 | pathogenic | -3.428 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
P/F | 0.9994 | likely_pathogenic | 0.9994 | pathogenic | -0.858 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
P/G | 0.99 | likely_pathogenic | 0.9914 | pathogenic | -1.669 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | I |
P/H | 0.9978 | likely_pathogenic | 0.9981 | pathogenic | -1.129 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
P/I | 0.9867 | likely_pathogenic | 0.9884 | pathogenic | -0.547 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | I |
P/K | 0.9982 | likely_pathogenic | 0.9981 | pathogenic | -1.516 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
P/L | 0.9672 | likely_pathogenic | 0.9704 | pathogenic | -0.547 | Destabilizing | 1.0 | D | 0.797 | deleterious | D | 0.622781201 | None | None | I |
P/M | 0.9947 | likely_pathogenic | 0.9958 | pathogenic | -0.936 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
P/N | 0.9987 | likely_pathogenic | 0.9988 | pathogenic | -1.987 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | I |
P/Q | 0.9961 | likely_pathogenic | 0.9965 | pathogenic | -2.088 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.664540478 | None | None | I |
P/R | 0.9938 | likely_pathogenic | 0.9934 | pathogenic | -1.114 | Destabilizing | 1.0 | D | 0.845 | deleterious | D | 0.648319313 | None | None | I |
P/S | 0.9881 | likely_pathogenic | 0.9899 | pathogenic | -2.217 | Highly Destabilizing | 1.0 | D | 0.832 | deleterious | D | 0.664136869 | None | None | I |
P/T | 0.9736 | likely_pathogenic | 0.9764 | pathogenic | -2.037 | Highly Destabilizing | 1.0 | D | 0.825 | deleterious | D | 0.648319313 | None | None | I |
P/V | 0.965 | likely_pathogenic | 0.967 | pathogenic | -0.792 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | I |
P/W | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -1.266 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
P/Y | 0.9994 | likely_pathogenic | 0.9994 | pathogenic | -0.929 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.