Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33315 | 100168;100169;100170 | chr2:178537166;178537165;178537164 | chr2:179401893;179401892;179401891 |
N2AB | 31674 | 95245;95246;95247 | chr2:178537166;178537165;178537164 | chr2:179401893;179401892;179401891 |
N2A | 30747 | 92464;92465;92466 | chr2:178537166;178537165;178537164 | chr2:179401893;179401892;179401891 |
N2B | 24250 | 72973;72974;72975 | chr2:178537166;178537165;178537164 | chr2:179401893;179401892;179401891 |
Novex-1 | 24375 | 73348;73349;73350 | chr2:178537166;178537165;178537164 | chr2:179401893;179401892;179401891 |
Novex-2 | 24442 | 73549;73550;73551 | chr2:178537166;178537165;178537164 | chr2:179401893;179401892;179401891 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | rs1401105733 | -2.039 | 0.998 | D | 0.803 | 0.529 | 0.51230852224 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/T | rs1401105733 | -2.039 | 0.998 | D | 0.803 | 0.529 | 0.51230852224 | gnomAD-4.0.0 | 1.5916E-06 | None | None | None | None | N | None | 5.65867E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.7778 | likely_pathogenic | 0.7548 | pathogenic | -2.037 | Highly Destabilizing | 0.992 | D | 0.718 | prob.delet. | N | 0.518134949 | None | None | N |
P/C | 0.9772 | likely_pathogenic | 0.9785 | pathogenic | -1.462 | Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
P/D | 0.9983 | likely_pathogenic | 0.9982 | pathogenic | -2.708 | Highly Destabilizing | 0.999 | D | 0.812 | deleterious | None | None | None | None | N |
P/E | 0.9963 | likely_pathogenic | 0.9955 | pathogenic | -2.651 | Highly Destabilizing | 0.999 | D | 0.81 | deleterious | None | None | None | None | N |
P/F | 0.9992 | likely_pathogenic | 0.999 | pathogenic | -1.593 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
P/G | 0.9849 | likely_pathogenic | 0.9833 | pathogenic | -2.43 | Highly Destabilizing | 0.997 | D | 0.813 | deleterious | None | None | None | None | N |
P/H | 0.9961 | likely_pathogenic | 0.9945 | pathogenic | -2.149 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | D | 0.557003259 | None | None | N |
P/I | 0.9916 | likely_pathogenic | 0.9895 | pathogenic | -1.003 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
P/K | 0.9983 | likely_pathogenic | 0.9974 | pathogenic | -1.839 | Destabilizing | 0.999 | D | 0.814 | deleterious | None | None | None | None | N |
P/L | 0.9672 | likely_pathogenic | 0.9562 | pathogenic | -1.003 | Destabilizing | 0.999 | D | 0.891 | deleterious | D | 0.555228832 | None | None | N |
P/M | 0.9947 | likely_pathogenic | 0.9937 | pathogenic | -0.681 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
P/N | 0.9978 | likely_pathogenic | 0.9977 | pathogenic | -1.791 | Destabilizing | 0.999 | D | 0.894 | deleterious | None | None | None | None | N |
P/Q | 0.9947 | likely_pathogenic | 0.9925 | pathogenic | -1.901 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
P/R | 0.9944 | likely_pathogenic | 0.9904 | pathogenic | -1.321 | Destabilizing | 0.999 | D | 0.88 | deleterious | D | 0.524655862 | None | None | N |
P/S | 0.9664 | likely_pathogenic | 0.9608 | pathogenic | -2.251 | Highly Destabilizing | 0.957 | D | 0.571 | neutral | N | 0.503398056 | None | None | N |
P/T | 0.9577 | likely_pathogenic | 0.9534 | pathogenic | -2.086 | Highly Destabilizing | 0.998 | D | 0.803 | deleterious | D | 0.529744744 | None | None | N |
P/V | 0.9616 | likely_pathogenic | 0.9564 | pathogenic | -1.318 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
P/W | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -1.979 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
P/Y | 0.9994 | likely_pathogenic | 0.9992 | pathogenic | -1.689 | Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.